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Displaying 50 of 1,272 results for "TUB"
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  1. Transcription profiling of mouse B6 and tub/tub mice strains muscle tissues ArrayExpress

    ID: E-MEXP-47

    Description: uscle RNA from 3 biological replicates for B6 and tub/tub mice strains....

  2. Transgenic expression of human PON1 in Drosophila melanogaster under the Tub driver BioProject

    ID: PRJNA141373

    Keywords: Transcriptome or Gene expression

    Access Type: download

  3. Crystal Structure Analysis of the human Tub protein (isoform a) spanning residues 289 through 561 PDB

    ID: PDB:1S31

    Description: tubby isoform a

  4. Transcription profiling of mouse B6 and tub/tub mice strains muscle tissues OmicsDI

    ID: E-MEXP-47

    Date Released: 05-03-2014

    Description: uscle RNA from 3 biological replicates for B6 and tub/tub mice strains....

  5. Mycobacterium wolinskyi strain:CDC_01 : Mycobacterium wolinskyi strain:CDC_01 Genome sequencing BioProject

    ID: PRJNA291041

    Keywords: genome sequencing

    Access Type: download

    dataset.description: A sequenced Mycobacterium wolinskyi isolated from a hot tub outbreak
  6. Transgenic expression of human PON1 in Drosophila melanogaster under the Tub driver ArrayExpress

    ID: E-GEOD-29534

    Description: in Drosophila melanogaster using the Gal4 system Tub driver. RNA from 30 flies from each of 3 genotypes was used to hybridize 4 arrays in a 12-plex array (4 technical replicates, 3 genotypes)....

  7. Genes regulated by ectopic expression of Sage in the entire Drosophila embryo using RNA from tub-Gal4 embryos. BioProject

    ID: PRJNA188563

    Keywords: Transcriptome or Gene expression

    Access Type: download

  8. Genes regulated by ectopic expression of Sage in the entire Drosophila embryo using RNA from tub-Gal4 embryos. OmicsDI

    ID: E-GEOD-44090

    Date Released: 07-08-2015

    Description: FoxA transcription factors play major roles in organ-specific gene expression. How FoxA proteins achieve specificity is unclear, given t...

  9. Fig2 Dryad

    DateIssued: 11-04-2016

    Description: osed to 20 mM H2O2 for 1 h with shaking. Tubulin (Tub) was used as a loading control. (B) Hydroperoxide levels in TC cells in the absence (red bar) and presence (green bar) of 20 mM H2O2 were assessed using FOX reagent and were calculated relative to that in WT cells grown under normal conditions, which was set to 100%. (C) Mid-log phase yeast were exposed to 20 mM H2O2 for ...

  10. Analysis of Drosophila salivary glands and Kc cells with depleted levels of linker histone H1 (Illumina smRNA-Seq] BioProject

    ID: PRJNA190016

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: g Nautilus (control) or linker histone H1 using a Tub-Gal4 driver. Overall design: ~200 larvae were used to isolate salivary glands or ovaries, independently. Total RNA was isolated using Trizol reagent following manufacturer's guidelines. Then 5 µg of total RNA was separa...
  11. Analysis of Drosophila salivary glands and Kc cells with depleted levels of linker histone H1 (Illumina smRNA-Seq] ArrayExpress

    ID: E-GEOD-44399

    Description: g Nautilus (control) or linker histone H1 using a Tub-Gal4 driver. ~200 larvae were used to isolate salivary glands or ovaries, independently. Total RNA was isolated using Trizol reagent following manufacturer's guidelines. Then 5 µg of total RNA was separated on a polyacr...

  12. Transgenic expression of human PON1 in Drosophila melanogaster under the Tub driver OmicsDI

    ID: E-GEOD-29534

    Date Released: 06-10-2011

    Description: in Drosophila melanogaster using the Gal4 system Tub driver. RNA from 30 flies from each of 3 genotypes was used to hybridize 4 arrays in a 12-plex array (4 technical replicates, 3 genotypes)....

  13. Genes regulated by ectopic expression of Sage in the entire Drosophila embryo using RNA from tub-Gal4 embryos ArrayExpress

    ID: E-GEOD-44090

    Description: FoxA transcription factors play major roles in organ-specific gene expression. How FoxA proteins achieve specificity is unclear, given t...

  14. Yki-induced intestinal stem cells (ISCs) overproliferation remotely affects muscular gene expression in Drosophila ArrayExpress

    ID: E-GEOD-65325

    Description: sed 10 thoraces dissected out from both esg-Gal4, tub-Gal80ts, UAS-GFP/+ (Con) and esg-Gal4, tub-Gal80ts, UAS-GFP/UAS-Yki-act (Yki) flies incubated for 8 days at 29°C. After assessing RNA quality with Agilent Bioanalyzer, mRNAs were enriched by poly-A pull-down. Then, sequencing libraries constructed with Illumina TruSeq RNA prep kit were sequenced using Illumina HiSeq2000 at the Columbia Genome Center (). We multiplexed samples in each lane, which yields targeted number of single-e...

  15. RNA-Seq of mouse eye and retina tissues from wild type and Nrl transcription factor knockout mice BioProject

    ID: PRJNA140961

    Keywords: Transcriptome or Gene expression

    Access Type: download

  16. Ecological_Monographs_Data_for_Dryad Dryad

    DateIssued: 02-01-2014

    Description: Data for Ecological Monographs MS 11-2284. Multiple predator species alter prey behavior, population growth and a trophic cascade in a model estuarine...

  17. Yki-induced intestinal stem cells (ISCs) overproliferation remotely affects muscular gene expression in Drosophila OmicsDI

    ID: E-GEOD-65325

    Date Released: 02-12-2015

    Description: sed 10 thoraces dissected out from both esg-Gal4, tub-Gal80ts, UAS-GFP/+ (Con) and esg-Gal4, tub-Gal80ts, UAS-GFP/UAS-Yki-act (Yki) flies incubated for 8 days at 29°C. After assessing RNA quality with Agilent Bioanalyzer, mRNAs were enriched by poly-A pull-down. Then, sequencing libraries constructed with Illumina TruSeq RNA prep kit were sequenced using Illumina HiSeq2000 at the Columbia Genome Center (http://systemsbiology.columbia.edu/genome-center). We multiplexed samples in eac...

  18. TBB_PNECA UniProt:Swiss-Prot

    ID: P24637

    Description: Tubulin beta chain GTP

    gene.name: TUB-B
  19. RIP-chip analysis of the C. elegans PUF protein FBF ArrayExpress

    ID: E-GEOD-19922

    Description: stage) expressing either a rescuing FBF-1-GFP or TUB-GFP transgene under the control of a germline promoter (pie-1). An immoblized anti-GFP antibody was then used to purify the GFP fusion proteins from extracts. RNA was then extracted from the pellets and analyzed on Affymetrix microarrays. Four biological replicates were performed, each consisting of a FBF-GFP and a TUB-GFP sample processed in parallel....

  20. RNA-Seq of mouse eye and retina tissues from wild type and Nrl transcription factor knockout mice ArrayExpress

    ID: E-GEOD-29752

    Description: n is still poorly understood. Knockout of the Nrl transcription factor in mice produces a retina overpopulated with S-cone like photoreceptors along with absence of rod photoreceptors and recapitulates many of the phenotypic features seen in human ESCS patients. We wanted to study this murine model through a combinatorial genetic and structural approach to improve understanding of the disease process that leads to photoreceptor degeneration and blindness, poten...

  21. MicroRNA-dependent transposable element transcriptional silencing in Drosophila somatic ovarian cells [RNA-Seq] ArrayExpress

    ID: E-GEOD-60972

    Description: t negative Drosha protein coupled or not with the Tub-GAL80[ts]GAL4 inhibitor....

  22. Phylogram for MP tree build using the five loci TEF1-TUB-CAL-HIS-ITS for the 96 Diaporthe species PeerJ

    ID: doi:10.7287/PEERJ.PREPRINTS.2822V1/SUPP-4

    Release Date: 02-21-2017

    Creators: Santos, Liliana

  23. Phylogram for ML tree build using the five loci TEF1-TUB-CAL-HIS-ITS for the 96 Diaporthe species PeerJ

    ID: doi:10.7287/PEERJ.PREPRINTS.2822/SUPP-5

    Release Date: 02-21-2017

    Creators: Santos, Liliana

  24. Fig4 Dryad

    DateIssued: 11-04-2016

    Description: ation was evaluated by western blotting. Tubulin (Tub) was used as a loading control. (C) Growth kinetics during fermentation was assessed by measuring the OD600 at 2-h intervals for the indicated time. Squares, WT cells; circles, TC cells. (D) Cell viability during fermentation at 30°C was assessed by a spotting assay. Cells were harvested after 24 h (upper panel), 48 h (middle panel), and 72 h (lower panel) of fermentation and serially diluted to 10−9. A 5-µL aliquot of each diluted solution was spotted onto YPD agar plates. After incubation for 3 days, the plates were photographed. (E) Stress response t...

  25. TBAB_SCHCO UniProt:Swiss-Prot

    ID: P49742

    Description: Tubulin alpha-1B chain GTP Involved in polymerization

    gene.name: TUB-1B
  26. RIP-chip analysis of the C. elegans PUF protein FBF BioProject

    ID: PRJNA121991

    Keywords: Other

    Access Type: download

    dataset.description: stage) expressing either a rescuing FBF-1-GFP or TUB-GFP transgene under the control of a germline promoter (pie-1). An immoblized anti-GFP antibody was then used to purify the GFP fusion proteins from extracts. RNA was then extracted from the pellets and analyzed on Affymetrix microarrays. Four biological replicates were performed, each consisting of a FBF-GFP and a TUB-GFP sample processed in parallel....
  27. MicroRNA-dependent transposable element transcriptional silencing in Drosophila somatic ovarian cells [RNA-Seq] BioProject

    ID: PRJNA260014

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: t negative Drosha protein coupled or not with the Tub-GAL80[ts]GAL4 inhibitor....
  28. Different isoforms of Maxwell´s Demon, a conserved cell membrane protein, mediate lose/win decisions during cell competition BioProject

    ID: PRJNA126497

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: . Overall design: Two samples have been analysed: tub>dmyc>Gal4 transgene cells (competitor) and tub>cd2>Gal4 control cells (non competitor) at different time points (0, 12, 24 and 48 hours). Each experiment was replicated 6 times, three of them by dye swap....
  29. Yki-induced intestinal stem cells (ISCs) overproliferation remotely affects muscular gene expression in Drosophila BioProject

    ID: PRJNA273674

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: sed 10 thoraces dissected out from both esg-Gal4, tub-Gal80ts, UAS-GFP/+ (Con) and esg-Gal4, tub-Gal80ts, UAS-GFP/UAS-Yki-act (Yki) flies incubated for 8 days at 29°C. After assessing RNA quality with Agilent Bioanalyzer, mRNAs were enriched by poly-A pull-down. Then, sequencing libraries constructed with Illumina TruSeq RNA prep kit were sequenced using Illumina HiSeq2000 at the Columbia Genome Center (http://systemsbiology.columbia.edu/genome-center). We multiplexed samples in eac...
  30. TBB3_ECHMU UniProt:Swiss-Prot

    ID: Q9NFZ5

    Description: Tubulin beta-3 chain GTP

    gene.name: TUB-3
  31. TBAA_PNECA UniProt:Swiss-Prot

    ID: Q07972

    Description: Tubulin alpha chain

    gene.name: TUB-A
  32. TBB1_ECHMU UniProt:Swiss-Prot

    ID: Q9NFZ7

    Description: Tubulin beta-1 chain GTP

    gene.name: TUB-1
  33. TBG_PLAFO UniProt:Swiss-Prot

    ID: P34787

    Description: Tubulin gamma chain GTP

    gene.name: G-TUB
  34. TBB_SCHCO UniProt:Swiss-Prot

    ID: P30668

    Description: Tubulin beta chain GTP

    gene.name: TUB-2
  35. TBB2_ECHMU UniProt:Swiss-Prot

    ID: Q9NFZ6

    Description: Tubulin beta-2 chain GTP

    gene.name: TUB-2
  36. TBAA_SCHCO UniProt:Swiss-Prot

    ID: P49741

    Description: Tubulin alpha-1A chain GTP Involved in polymerization

    gene.name: TUB-1A
  37. Phylogram for ML tree build using the five loci TEF1-TUB-CAL-HIS-ITS for the 96 Diaporthe species PeerJ

    ID: doi:10.7287/PEERJ.PREPRINTS.2822V1/SUPP-5

    Release Date: 02-21-2017

    Creators: Santos, Liliana

  38. Phylogram for MP tree build using the five loci TEF1-TUB-CAL-HIS-ITS for the 96 Diaporthe species PeerJ

    ID: doi:10.7287/PEERJ.PREPRINTS.2822/SUPP-4

    Release Date: 02-21-2017

    Creators: Santos, Liliana

  39. Different isoforms of Maxwell´s Demon, a conserved cell membrane protein, mediate lose/win decisions during cell competition OmicsDI

    ID: E-GEOD-21230

    Date Released: 05-02-2014

    Description: icts among cells. Two samples have been analysed: tub>dmyc>Gal4 transgene cells (competitor) and tub>cd2>Gal4 control cells (non competitor) at different time points (0, 12, 24 and 48 hours). Each experiment was replicated 6 times, three of them by dye swap....

  40. RIP-chip analysis of the C. elegans PUF protein FBF OmicsDI

    ID: E-GEOD-19922

    Date Released: 05-02-2014

    Description: stage) expressing either a rescuing FBF-1-GFP or TUB-GFP transgene under the control of a germline promoter (pie-1). An immoblized anti-GFP antibody was then used to purify the GFP fusion proteins from extracts. RNA was then extracted from the pellets and analyzed on Affymetrix microarrays. Four biological replicates were performed, each consisting of a FBF-GFP and a TUB-GFP sample processed in parallel....

  41. Phenological data Dryad

    DateIssued: 07-29-2015

    Description: ); 'n unmated fem' = number of unmated females; n tub = number of tuberosus males; n gib = number of gibbosus males; n juv = number of immature individuals)...

  42. Fig1 Dryad

    DateIssued: 11-04-2016

    Description: expressed in this yeast strain. PDA1 and tubulin (Tub) were used as housekeeping controls for RT-PCR and western blotting, respectively. The molecular size of the PCR product and molecular weight of the detected band were approximately 494 bp and 47 kDa, respectively. Stress tolerance to hydrogen peroxide was evaluated by cell survival, growth kinetics, and spotting assays. (E) To monitor cell viability, yeast cells precultured in YPD medium were inoculated into fresh YPD medium and exposed to different concentrations of H2O2 for 16 h at 28°C. Then, the optical density at 600 nm (OD600) was measured. Circles, cells transformed with p426GPD-OsMDHA...

  43. Different isoforms of Maxwell´s Demon, a conserved cell membrane protein, mediate lose/win decisions during cell competition ArrayExpress

    ID: E-GEOD-21230

    Description: icts among cells. Two samples have been analysed: tub>dmyc>Gal4 transgene cells (competitor) and tub>cd2>Gal4 control cells (non competitor) at different time points (0, 12, 24 and 48 hours). Each experiment was replicated 6 times, three of them by dye swap....

  44. Transcription profiling of Drosophila homozygous CP190[1] 0 hour white prepupae (non tubby, red malpighian tubul... ArrayExpress

    ID: E-FLYC-1

    Description: ith an N-terminal BTB/POZ domain (similar to GAGA factor). Experimental studies have identified a 128 amino acid domain that direct centrosome association and a bipartite NLS. Interest in the function of CP190 was initially driven by an interest in centrosome function. Is is also fascinating to know why a protein that forms a core component of the centrosome also shares the attributes and distribution expected of a regulator of gene expression. CP190 mutants (EMS generated...

  45. Transcription profiling of Drosophila homozygous CP190[1] 0 hour white prepupae (non tubby, red malpighian tubul... OmicsDI

    ID: E-FLYC-1

    Date Released: 05-01-2014

    Description: ith an N-terminal BTB/POZ domain (similar to GAGA factor). Experimental studies have identified a 128 amino acid domain that direct centrosome association and a bipartite NLS. Interest in the function of CP190 was initially driven by an interest in centrosome function. Is is also fascinating to know why a protein that forms a core component of the centrosome also shares the attributes and distribution expected of a regulator of gene expression. CP190 mutants (EMS generated...

  46. RNA-Seq of mouse eye and retina tissues from wild type and Nrl transcription factor knockout mice OmicsDI

    ID: E-GEOD-29752

    Date Released: 04-03-2013

    Description: n is still poorly understood. Knockout of the Nrl transcription factor in mice produces a retina overpopulated with S-cone like photoreceptors along with absence of rod photoreceptors and recapitulates many of the phenotypic features seen in human ESCS patients. We wanted to study this murine model through a combinatorial genetic and structural approach to improve understanding of the disease process that leads to photoreceptor degeneration and blindness, poten...

  47. Data from: Utility of internally transcribed spacer region of rDNA (ITS) and β-tubulin gene sequences to infer genetic diversity and migration patter... Dryad

    DateIssued: 02-05-2016

    Description: spacer region, ITS1-5.8S-ITS2, and β-tubulin, β-TUB) sequence data set was generated and used in the analyses. Sequences of the ITS region were less informative than β-tubulin gene sequences based on comparisons of DNA polymorphism indices. Trinidad had the highest genetic diversity and also had the largest effective population size in pairwise comparisons with the other populations. The Trinidad population also demonstrated significant genetic differentiation from the other populations. AMOVA and STRUCTURE analyses both suggested significant genetic variation within populations more so than among populations. A consensus Maximum Likelihood tree based on β-

  48. Network_Positions_Observed Dryad

    DateIssued: 07-13-2016

    Description: isturbed), Period 1 = time 1 and 2 = time 2. The tub column refers to the population the individuals were placed in. Elytra is in millimeters and represents the measurement from the caudal end of the elytra to the scutellum. All network metrics were calculated using the R package t-net with strength assigned an alpha o...

  49. Analysis of Drosophila salivary glands and Kc cells with depleted levels of linker histone H1 (Illumina smRNA-Seq] OmicsDI

    ID: E-GEOD-44399

    Date Released: 04-29-2013

    Description: g Nautilus (control) or linker histone H1 using a Tub-Gal4 driver. ~200 larvae were used to isolate salivary glands or ovaries, independently. Total RNA was isolated using Trizol reagent following manufacturer's guidelines. Then 5 µg of total RNA was separated on a polyacr...

  50. Transcriptome perturbation analysis from 16 hours APF Drosophila notum. OmicsDI

    ID: E-GEOD-53010

    Date Released: 06-03-2014

    Description: in Drosophila notum by the over-expression of the transcription factors Achaete, Asense, E(spl)m3-HLH and Senseless. Transient over-expression of GFP (control), Achaete (Ac), Senseless (Sens), Asense (Ase) and E(spl)m3-HLH transcription


Displaying 50 of 1,272 results for "TUB"