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Displaying 20 of 130 results for "TSC22D3"
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  1. Translational control in early adipogenesis OmicsDI

    ID: E-GEOD-29744

    Date Released: 06-26-2012

    Description: l27a, Rpl6, Rpl7a, Rps18, Rpsa, Sema3g, Tbc1d22a, Tsc22d3), form part of ribosomes (L6, L7a, L18, L27a, Sa, S18, S15a pseudogene), act on the regulation of translation (eIF4b) or transcription (Hsf1, Irf6, Myc, Tsc22d3). Others act as chaperones (Bag3, Hspa8/Hsc70, Hsp90ab1) or in other metabolic or signals transducing processes. We conclude that a moderate reorganisation of the functionality of the ribosomal machinery is a very important step for the growth and expression control at the beginning of adipogenesis. 12 samples: 4 (0h, non-polysomal fraction; 0h, polysomal fraction; 6h, non-polysomal fraction; 6h, polysomal fraction) x3 replicates...

  2. MSL2 reads DNA shape to distinguish X from autosome for dosage compensation (DIP experiments) BioProject

    ID: PRJNA302264

    Keywords: Epigenomics

    Access Type: download

  3. Methyl DIP-chip from self-pollinated ddm1 mutant and ddm1 kyp double mutant ArrayExpress

    ID: E-GEOD-34222

    Description: ent DNA methylase gene CHROMOMETHYALSE3, the ddm1-induced de novo cytosine methylation was abolished for all three contexts, CpG, CpHpG, and CpHpH. Furthermore, RNAi mutants showed strong developmental defects when combined with ddm1 mutation. Our results revealed unexpected interactions of epigenetic modifications, which could be conserved among diverse eukaryotes. comparison of DNA methylation between WT, 2G ddm1 (2 replications), 8G ddm1 (2 replications), and 8G ddm1 kyp...

  4. T22D3_PONAB UniProt:Swiss-Prot

    ID: Q5RED5

    Description: TSC22 domain family protein 3 AP1-binding Leucine-

  5. Role of Serine 134 phosphorylation of the glucocorticoid receptor (GR) in glucocorticoid signaling ArrayExpress

    ID: E-GEOD-28912

    Description: come directly activated. Here we report the human glucocorticoid receptor (GR) Serine 134 as a novel target for p38 MAPK. Unlike most other phosphorylation events that occur on the GR, phosphorylation of Ser134 was found to be hormone-independent in several human and rat c...

  6. actions of glucocorticoids by phosphorylating the glucocorticoid receptor through p38 mitogen-activated protein kinase... ArrayExpress

    ID: E-GEOD-22647

    Description: eral supplies. We showed here that AMPK regulates glucocorticoid actions on carbohydrate metabolism by targeting the glucocorticoid receptor (GR) and modifying transcription of glucocorticoid-responsive genes in a tissue- and promoter-specific fashion. Activation of AMPK in rats reversed glucocorticoid-induced hepatic steatosis and suppressed gluc

  7. Translational control in early adipogenesis BioProject

    ID: PRJNA141175

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: l27a, Rpl6, Rpl7a, Rps18, Rpsa, Sema3g, Tbc1d22a, Tsc22d3), form part of ribosomes (L6, L7a, L18, L27a, Sa, S18, S15a pseudogene), act on the regulation of translation (eIF4b) or transcription (Hsf1, Irf6, Myc, Tsc22d3). Others act as chaperones (Bag3, Hspa8/Hsc70, Hsp90ab1) or in other metabolic or signals transducing processes. We conclude that a moderate reorganisation of the functionality of the ribosomal machinery is a very important step for the growth and expression control at the beginning of adipogenesis. Overall design: 12 samples: 4 (0h, non-polysomal fraction; 0h, polysomal fraction; 6h, non-polysomal fraction; 6h, polysomal fraction) x3 replicates...
  8. Methyl DIP-chip from self-pollinated ddm1 mutant and ddm1 kyp double mutant BioProject

    ID: PRJNA149817

    Keywords: Epigenomics

    Access Type: download

  9. Transcription profiling by array of diploid, triplod and tetraploid Arabidopsis plants ArrayExpress

    ID: E-GEOD-6828

    Description: evelopmental stage1.02, 2 leaves). Sample names:; DIP diploid; TET tetraploid; TFE triploid female excess; TME triplod male excess; Experimenter name: Olivier Garnier; Experimenter phone: 00-353-21-490-4028; Experimenter address: Plant molecular genetics lab, Dpt of Biochemistry, UCC; Experimenter address: Lee Maltings Prospect row; Experimenter zip/postal_code: Cork; Experimenter country: Ireland Experiment Overall Design: 11 samples were used in this experiment...

  10. Reconstruction of the dynamic regulatory network that controls Th17 cell differentiation by systematic perturbation in primary cells (ChIP-Seq) ArrayExpress

    ID: E-GEOD-43949

    Description: the differentiation of Th17 cells. DNA binding of TSC22D3 in Th17 cells compared to WCE...

  11. marine metagenome : Marine photic zone, New Caledonia Lagoon raw sequence reads, nitrogenase amplicons BioProject

    ID: PRJNA300416

    Keywords: raw sequence reads

    Access Type: download

    dataset.description: fertilization with dissolved inorganic phosphate (DIP) over a 23-day period, using both polymerase chain reaction (PCR) amplification of nitrogenase genes (nifH) and quantitative PCR (qPCR) assays targeting known marine diazotroph lineages....
  12. Loss of TET2 in hematopoietic cells leads to DNA hypermethylation of active enhancers and induction of leukemogenesis (MeDIP-seq) ArrayExpress

    ID: E-GEOD-59579

    Description: ing enhancers from aberrant DNA methylation. 5hmC-DIP-seq analysis for distribution of 5hmC in in vitro-grown hematopoietic cells transduced with AML1-ETO...

  13. Genome-wide analysis of expression and DNA methylation at CpG-island-associated sense-antisense transcript loci in mouse ArrayExpress

    ID: E-GEOD-14392

    Description: .5 and 13.5 days postcoitum (dpc)]) were used for DIP chip experiments. Nine of twelve tissues were separately analyzed classified on the basis of sex. A technical duplication of DIP chip analysis was performed by using the same genomic DNA of male kidney....

  14. Tumor hypoxia causes DNA hypermethylation by reducing TET activity (DIP-Seq) BioProject

    ID: PRJNA291094

    Keywords: Epigenomics

    Access Type: download

  15. actions of glucocorticoids by phosphorylating the glucocorticoid receptor through p38 mitogen-activated protein kinase.... BioProject

    ID: PRJNA128033

    Keywords: Transcriptome or Gene expression

    Access Type: download

  16. Reconstruction of the dynamic regulatory network that controls Th17 cell differentiation by systematic perturbation in primary cells (ChIP-Seq) BioProject

    ID: PRJNA188244

    Keywords: Epigenomics

    Access Type: download

    dataset.description: ion of Th17 cells. Overall design: DNA binding of TSC22D3 in Th17 cells compared to WCE...
  17. Novel targets for the transcription factors MEF2 in MA-10 Leydig cells ArrayExpress

    ID: E-GEOD-64128

    Description: e Pde8a, Por, Ahr, Bmal1, Cyp1a1, Cyp1b1, Map2k1, Tsc22d3, Nr0b2, Smad4, and Star, which were all downregulated in the absence of MEF2. In silico analyses revealed the presence of MEF2 binding sites within the first 2 kb upstream the transcription start site of the Por, Bmal1, and Nr0b2 promoters, which suggests a direct regulation by MEF2. Using transient transfections in MA-10 Leydig cells, siRNA knockdown, and a MEF2-Engrailed dominant negative, we found that MEF2 activates the Por, Bmal1 and Nr0b2 promoters and that this requires an intact MEF2 element. Our results identify novel target genes for MEF2 and define MEF2 as an important regulator of Leydig cell function and male reproduction. MA-10 Leydig cells were treated with siRNA MEF2A/2D (siRNA MEF2) or scrambled siRNA as control (siRNA Ctrl) 48h before total RNA extraction....

  18. Role of Serine 134 phosphorylation of the glucocorticoid receptor (GR) in glucocorticoid signaling BioProject

    ID: PRJNA140563

    Keywords: Transcriptome or Gene expression

    Access Type: download

  19. individual dip sampling data for mosquito larvae in Ethiopia Dryad

    DateIssued: 05-05-2016

    Description: epth: depth in cm at the point of each individual dip sample. Area: area of the water body being sampled. Mean_depth: mean of depth measures from site. ph: ph at each site. Tall_rip: percentage estimate of tall (>20cm) riparian vegetation around the water body. Temp: temperature in degrees celsius at the s...

  20. Base-resolution maps of 5-formylcytosine and 5-carboxylcytosine reveal genome-wide DNA demethylation dynamics ArrayExpress

    ID: E-GEOD-56429

    Description: in various human pathologies. In mammals, the TET family of dioxygenases can oxidize 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC) in a stepwise manner. 5fC and 5caC are selectively recognized and excised by mammalian thymine DNA glycosylase (TDG), and ...


Displaying 20 of 130 results for "TSC22D3"