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Displaying 56 of 56 results for "TSC22D3"
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  1. Translational control in early adipogenesis ArrayExpress

    ID: E-GEOD-29744

    Description: l27a, Rpl6, Rpl7a, Rps18, Rpsa, Sema3g, Tbc1d22a, Tsc22d3), form part of ribosomes (L6, L7a, L18, L27a, Sa, S18, S15a pseudogene), act on the regulation of translation (eIF4b) or transcription (Hsf1, Irf6, Myc, Tsc22d3). Others act as chaperones (Bag3, Hspa8/Hsc70, Hsp90ab1) or in other metabolic or signals transducing processes. We conclude that a moderate reorganisation of the functionality of the ribosomal machinery is a very important step for the growth and expression control at the beginning of adipogenesis. 12 samples: 4 (0h, non-polysomal fraction; 0h, polysomal fraction; 6h, non-polysomal fraction; 6h, polysomal fraction) x3 replicates...

  2. Translational control in early adipogenesis OmicsDI

    ID: E-GEOD-29744

    Date Released: 06-26-2012

    Description: l27a, Rpl6, Rpl7a, Rps18, Rpsa, Sema3g, Tbc1d22a, Tsc22d3), form part of ribosomes (L6, L7a, L18, L27a, Sa, S18, S15a pseudogene), act on the regulation of translation (eIF4b) or transcription (Hsf1, Irf6, Myc, Tsc22d3). Others act as chaperones (Bag3, Hspa8/Hsc70, Hsp90ab1) or in other metabolic or signals transducing processes. We conclude that a moderate reorganisation of the functionality of the ribosomal machinery is a very important step for the growth and expression control at the beginning of adipogenesis. 12 samples: 4 (0h, non-polysomal fraction; 0h, polysomal fraction; 6h, non-polysomal fraction; 6h, polysomal fraction) x3 replicates...

  3. Escherichia coli : DIP-seq raw sequence reads BioProject

    ID: PRJNA303192

    Keywords: raw sequence reads

    Access Type: download

  4. T22D3_PONAB UniProt:Swiss-Prot

    ID: Q5RED5

    Description: TSC22 domain family protein 3 AP1-binding Leucine-zipper Phosphoserine

    gene.name: TSC22D3
  5. Translational control in early adipogenesis BioProject

    ID: PRJNA141175

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: l27a, Rpl6, Rpl7a, Rps18, Rpsa, Sema3g, Tbc1d22a, Tsc22d3), form part of ribosomes (L6, L7a, L18, L27a, Sa, S18, S15a pseudogene), act on the regulation of translation (eIF4b) or transcription (Hsf1, Irf6, Myc, Tsc22d3). Others act as chaperones (Bag3, Hspa8/Hsc70, Hsp90ab1) or in other metabolic or signals transducing processes. We conclude that a moderate reorganisation of the functionality of the ribosomal machinery is a very important step for the growth and expression control at the beginning of adipogenesis. Overall design: 12 samples: 4 (0h, non-polysomal fraction; 0h, polysomal fraction; 6h, non-polysomal fraction; 6h, polysomal fraction) x3 replicates...
  6. Transcriptome of a mouse kidney cortical collecting duct cell line: effects of aldosterone and vasopressin ArrayExpress

    ID: E-GEOD-678

    Description: In this study, we analyzed the transcriptome of a highly differentiated mouse clonal CCD principal cell line (mpkCCD(cl4)) and the changes in the tran...

  7. DIP-seq analysis of 5mC and 5hmC distributions in hESCs and day 12 neural cells BioProject

    ID: PRJNA282456

    Keywords: Epigenomics

    Access Type: download

  8. Reconstruction of the dynamic regulatory network that controls Th17 cell differentiation by systematic perturbation in primary cells (ChIP-Seq) ArrayExpress

    ID: E-GEOD-43949

    Description: the differentiation of Th17 cells. DNA binding of TSC22D3 in Th17 cells compared to WCE...

  9. Cost effectiveness of the NZ DIP guideline screening recommendations FINAL Dryad

    DateIssued: 05-18-2015

    Description: This is the decision analytic model designed to compare the cost effectiveness of the 2-step and 3-step screening strategies described in the article.

  10. DIP Using Image Encryption and XOR Operation Affine Transform Figshare

    ID: doi:10.6084/M9.FIGSHARE.1385151

    Release Date: 07-31-2015

    Description:

  11. DIP Using Image Encryption and XOR Operation Affine Transform Figshare

    ID: doi:10.6084/M9.FIGSHARE.1385151.V1

    Release Date: 01-19-2016

    Description:

  12. DIP-chip from Cbf1, Leu3, Pho2, Pho4, Rap1, Rox1, and Swi5 ArrayExpress

    ID: E-GEOD-13751

    Description: DNA Immunoprecipitation was performed using purified, naked, genomic DNA and purified recombinant DNA binding domains for S. cerevisiae transcription ...

  13. DIP-chip: Rapid and accurate determination of DNA-binding specificity BioProject

    ID: PRJNA97819

    Keywords: Epigenomics

    Access Type: download

  14. Crystal Structure Analysis of the Bb segment of Factor B complexed with Di-isopropyl-phosphate (DIP) PDB

    ID: PDB:1RS0

    Description: Complement factor B (E.C.3.4.21.47)

  15. Crystal Structure of the complex of Dpr6 Domain 1 bound to DIP-alpha Domain 1+2 PDB

    ID: PDB:5EO9

    Description: Dpr6, isoform C, CG32791, isoform A

  16. Transcriptome of a mouse kidney cortical collecting duct cell line: effects of aldosterone and vasopressin BioProject

    ID: PRJNA87623

    Keywords: Transcriptome or Gene expression

    Access Type: download

  17. Reconstruction of the dynamic regulatory network that controls Th17 cell differentiation by systematic perturbation in primary cells (ChIP-Seq) BioProject

    ID: PRJNA188244

    Keywords: Epigenomics

    Access Type: download

    dataset.description: ion of Th17 cells. Overall design: DNA binding of TSC22D3 in Th17 cells compared to WCE...
  18. Conformation of DIP-AST5 from 2D NMR data PDB

    ID: PDB:2JQS

    Description: Allatostatins

  19. Conformation of DIP-AST8 from 2D NMR data PDB

    ID: PDB:2JQU

    Description: Allatostatins

  20. Novel targets for the transcription factors MEF2 in MA-10 Leydig cells ArrayExpress

    ID: E-GEOD-64128

    Description: e Pde8a, Por, Ahr, Bmal1, Cyp1a1, Cyp1b1, Map2k1, Tsc22d3, Nr0b2, Smad4, and Star, which were all downregulated in the absence of MEF2. In silico analyses revealed the presence of MEF2 binding sites within the first 2 kb upstream the transcription start site of the Por, Bmal1, and Nr0b2 promoters, which suggests a direct regulation by MEF2. Using transient transfections in MA-10 Leydig cells, siRNA knockdown, and a MEF2-Engrailed dominant negative, we found that MEF2 activates the Por, Bmal1 and Nr0b2 promoters and that this requires an intact MEF2 element. Our results identify novel target genes for MEF2 and define MEF2 as an important regulator of Leydig cell function and male reproduction. MA-10 Leydig cells were treated with siRNA MEF2A/2D (siRNA MEF2) or scrambled siRNA as control (siRNA Ctrl) 48h before total RNA extraction....

  21. Role of Serine 134 phosphorylation of the glucocorticoid receptor (GR) in glucocorticoid signaling ArrayExpress

    ID: E-GEOD-28912

    Description: In response to environmental stressors and a variety of inflammatory cytokines, p38 MAPKs become directly activated. Here we report the human glucocor...

  22. Adenosine 5’ monophosphate-activated protein kinase regulates metabolic actions of glucocorticoids by phosphorylating the glucocorticoid receptor th... ArrayExpress

    ID: E-GEOD-22647

    Description: Glucocorticoids play central roles in the regulation of energy metabolism by shifting it toward catabolism, while AMPK is the master regulator of ener...

  23. Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity (ChIP/DIP-Seq data) ArrayExpress

    ID: E-GEOD-24841

    Description: We analyzed the genome-wide binding of Tet1 in control (shScr) and Tet1 knockdown (shTet1) mouse ES cells using two different Tet1 antibodies (Tet1-C ...

  24. Reconstruction of the dynamic regulatory network that controls Th17 cell differentiation by systematic perturbation in primary cells (ChIP-Seq) OmicsDI

    ID: E-GEOD-43949

    Date Released: 05-04-2014

    Description: the differentiation of Th17 cells. DNA binding of TSC22D3 in Th17 cells compared to WCE...

  25. DIP-chip from Cbf1, Leu3, Pho2, Pho4, Rap1, Rox1, and Swi5 BioProject

    ID: PRJNA109407

    Keywords: Epigenomics

    Access Type: download

  26. Transcription profiling by array of diploid, triplod and tetraploid Arabidopsis plants ArrayExpress

    ID: E-GEOD-6828

    Description: By reciprocally crossing 2x and 4x C24 ecotype plants, we have generated 4 types of offspring with various ploidy (2x; 3x; 4x) or parent-of-origin gen...

  27. Methyl DIP-chip from self-pollinated ddm1 mutant and ddm1 kyp double mutant ArrayExpress

    ID: E-GEOD-34222

    Description: Methylation of histone H3 lysine 9 (H3K9me) and small RNA are associated with constitutively silent chromatin in diverse eukaryotes including plants. ...

  28. Novel targets for the transcription factors MEF2 in MA-10 Leydig cells OmicsDI

    ID: E-GEOD-64128

    Date Released: 04-18-2015

    Description: e Pde8a, Por, Ahr, Bmal1, Cyp1a1, Cyp1b1, Map2k1, Tsc22d3, Nr0b2, Smad4, and Star, which were all downregulated in the absence of MEF2. In silico analyses revealed the presence of MEF2 binding sites within the first 2 kb upstream the transcription start site of the Por, Bmal1, and Nr0b2 promoters, which suggests a direct regulation by MEF2. Using transient transfections in MA-10 Leydig cells, siRNA knockdown, and a MEF2-Engrailed dominant negative, we found that MEF2 activates the Por, Bmal1 and Nr0b2 promoters and that this requires an intact MEF2 element. Our results identify novel target genes for MEF2 and define MEF2 as an important regulator of Leydig cell function and male reproduction. MA-10 Leydig cells were treated with siRNA MEF2A/2D (siRNA MEF2) or scrambled siRNA as control (siRNA Ctrl) 48h before total RNA extraction....

  29. marine metagenome : Marine photic zone, New Caledonia Lagoon raw sequence reads, nitrogenase amplicons BioProject

    ID: PRJNA300416

    Keywords: raw sequence reads

    Access Type: download

  30. Loss of TET2 in hematopoietic cells leads to DNA hypermethylation of active enhancers and induction of leukemogenesis (MeDIP-seq) ArrayExpress

    ID: E-GEOD-59579

    Description: DNA methylation is tightly regulated throughout mammalian development and altered methylation patterns are a hallmark of cancer. The methylcytosine di...

  31. Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity (ChIP/DIP-Seq data) BioProject

    ID: PRJNA133431

    Keywords: Epigenomics

    Access Type: download

  32. Adenosine 5’ monophosphate-activated protein kinase regulates metabolic actions of glucocorticoids by phosphorylating the glucocorticoid receptor th... BioProject

    ID: PRJNA128033

    Keywords: Transcriptome or Gene expression

    Access Type: download

  33. Novel targets for the transcription factors MEF2 in MA-10 Leydig cells BioProject

    ID: PRJNA270224

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: e Pde8a, Por, Ahr, Bmal1, Cyp1a1, Cyp1b1, Map2k1, Tsc22d3, Nr0b2, Smad4, and Star, which were all downregulated in the absence of MEF2. In silico analyses revealed the presence of MEF2 binding sites within the first 2 kb upstream the transcription start site of the Por, Bmal1, and Nr0b2 promoters, which suggests a direct regulation by MEF2. Using transient transfections in MA-10 Leydig cells, siRNA knockdown, and a MEF2-Engrailed dominant negative, we found that MEF2 activates the Por, Bmal1 and Nr0b2 promoters and that this requires an intact MEF2 element. Our results identify novel target genes for MEF2 and define MEF2 as an important regulator of Leydig cell function and male reproduction. Overall design: MA-10 Leydig cells were treated with siRNA MEF2A/2D (siRNA MEF2) or scrambled siRNA as control (siRNA Ctrl) 48h before total RNA extraction....
  34. Role of Serine 134 phosphorylation of the glucocorticoid receptor (GR) in glucocorticoid signaling BioProject

    ID: PRJNA140563

    Keywords: Transcriptome or Gene expression

    Access Type: download

  35. Base-resolution maps of 5-formylcytosine and 5-carboxylcytosine reveal genome-wide DNA demethylation dynamics ArrayExpress

    ID: E-GEOD-56429

    Description: 5-methylcytosine (5mC), the predominant epigenetic modification on DNA, plays critical roles in mammalian development and is dysregulated in various h...

  36. Genome-wide analysis reveals TET- and TDG-mediated 5-methylcytosine oxidation dynamics [MeDIP-Seq] ArrayExpress

    ID: E-GEOD-46111

    Description: Ten-eleven translocation (Tet) family of DNA dioxygenases converts 5-methylcytosine (5mC) into 5-hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC),...

  37. Methyl DIP-chip from self-pollinated ddm1 mutant and ddm1 kyp double mutant BioProject

    ID: PRJNA149817

    Keywords: Epigenomics

    Access Type: download

  38. Base-resolution maps of 5-formylcytosine and 5-carboxylcytosine reveal genome-wide DNA demethylation dynamics BioProject

    ID: PRJNA243290

    Keywords: Epigenomics

    Access Type: download

  39. Me-DIP-chip data from osteosarcoma tumours BioProject

    ID: PRJNA114171

    Keywords: Epigenomics

    Access Type: download

  40. Epigenetic and transcriptional landscapes of Dnmt3a-deficient olfactory sensory neurons ArrayExpress

    ID: E-GEOD-52464

    Description: During differentiation, neurons experience a reorganization of DNA modification patterns within their genomes. However, the mechanisms underlying this...

  41. Complementary Expression of Immunoglobulin Superfamily Ligands and Receptors in Synaptic Pairs in the Drosophila Visual System ArrayExpress

    ID: E-GEOD-68235

    Description: Purpose: Information processing in the brain relies on precise patterns of synapses between neurons. The molecular mechanisms by which this specificit...

  42. Genome-wide analysis of expression and DNA methylation at CpG-island-associated sense-antisense transcript loci in mouse ArrayExpress

    ID: E-GEOD-14392

    Description: Sense-antisense transcript (SAT) pairs are pairs of transcripts that fully or partially overlap but are transcribed in opposite directions. Although S...

  43. Transcriptome response to change in ploidy level in Arabidopsis BioProject

    ID: PRJNA99151

    Keywords: Transcriptome or Gene expression

    Access Type: download

  44. Me-DIP-chip data from osteosarcoma cell lines BioProject

    ID: PRJNA109227

    Keywords: Epigenomics

    Access Type: download

  45. MSL2 reads DNA shape to distinguish X from autosome for dosage compensation (DIP experiments) BioProject

    ID: PRJNA302264

    Keywords: Epigenomics

    Access Type: download

  46. Degrees of motion for proximal interphalangeal (PIP) and distal interphalangeal (DIP) joints for the shod (n=4) and unshod (n=4) conditions about the ... PeerJ

    ID: doi:10.7287/PEERJ.PREPRINTS.1779/SUPP-4

    Release Date: 02-23-2016

    Creators: Panagiotopoulou, Olga

  47. Degrees of motion for proximal interphalangeal (PIP) and distal interphalangeal (DIP) joints for the shod (n=4) and unshod (n=4) conditions about the ... PeerJ

    ID: doi:10.7287/PEERJ.PREPRINTS.1779V1/SUPP-4

    Release Date: 02-23-2016

    Creators: Panagiotopoulou, Olga

  48. A library of yeast transcription factor motifs ArrayExpress

    ID: E-GEOD-12349

    Description: The sequence specificity of DNA-binding proteins is the primary mechanism by which the cell recognizes genomic features. Here, we describe systematic ...

  49. Loss of TET2 in hematopoietic cells leads to DNA hypermethylation of active enhancers and induction of leukemogenesis (MeDIP-seq) BioProject

    ID: PRJNA255657

    Keywords: Epigenomics

    Access Type: download

  50. Genome-wide analysis reveals TET- and TDG-mediated 5-methylcytosine oxidation dynamics [MeDIP-Seq] BioProject

    ID: PRJNA197493

    Keywords: Epigenomics

    Access Type: download

  51. Complementary Expression of Immunoglobulin Superfamily Ligands and Receptors in Synaptic Pairs in the Drosophila Visual System BioProject

    ID: PRJNA282108

    Keywords: Transcriptome or Gene expression

    Access Type: download

  52. Tumor hypoxia causes DNA hypermethylation by reducing TET activity (DIP-Seq) BioProject

    ID: PRJNA291094

    Keywords: Epigenomics

    Access Type: download

  53. Genome-wide analysis of expression and DNA methylation at CpG-island-associated sense-antisense transcript loci in mouse BioProject

    ID: PRJNA111365

    Keywords: Other

    Access Type: download

  54. Epigenetic and transcriptional landscapes of Dnmt3a-deficient olfactory sensory neurons BioProject

    ID: PRJNA229056

    Keywords: Other

    Access Type: download

  55. Human hand muscle attachments for an OpenSim upper-extremity model SimTK

    ID: hand_muscle

    Description: The study described how to determine muscle attachment points for the index, middle, ring and little fingers in an OpenSim upper-extremity model. Data...

  56. A library of yeast transcription factor motifs BioProject

    ID: PRJNA113175

    Keywords: Other

    Access Type: download


Displaying 56 of 56 results for "TSC22D3"