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Displaying 20 of 1,657 results for "SHOX"
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  1. 1599758 RGD

    Description: Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an e...

    Creators: PhysGen , Rat Resource and Research Cen...

    biologicalEntity.identifiers: SS-Sod3m1Mcwi
  2. 1642282 RGD

    Description: Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an e...

    Creators: PGA

    biologicalEntity.identifiers: SS-Cacna1gm1Mcwi
  3. 1599762 RGD

    Description: Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an e...

    Creators: PGA

    biologicalEntity.identifiers: SS-Bdkrb2m2Mcwi
  4. 1642277 RGD

    Description: Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an e...

    Creators: PhysGen , Rat Resource and Research Center

    biologicalEntity.identifiers: SS-Cpt2m1Mcwi
  5. 1642273 RGD

    Description: Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an e...

    Creators: PhysGen

    biologicalEntity.identifiers: SS-Thbdm1Mcwi
  6. 1599765 RGD

    Description: Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an e...

    Creators: PGA

    biologicalEntity.identifiers: SS-Klf4m2Mcwi
  7. 728148 RGD

    Description: Strains SS/Jr and LEW were bred for F1 then backcrossed to S to give BC1, this was backcrossed to S to give BC2 and so on till BC5, BC5 was...

    Creators: Research Centre-CHUM, Montreal, Quebec, Canada

  8. 728139 RGD

    Description: the double congenic strain now homozygous for the SS Bp QTL alleles at both the chromosome 10 and chromosome 1 Bp QTLs...

    Creators: Max-Delbruck-Center for Molecular Medicine, Berlin, Germany

  9. Global hepatic gene expression in rainbow trout exposed to sewage effluents BioProject

    ID: PRJNA163639

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: ochemical oxygen demand (BOD7), suspended solids (SS), total nitrogen (Tot-N) and total phosphorus (Tot-P) were measured in all effluents (Samuelsson et al., 2011). The sampling took place during two consecutive days (day 14 and 15) due to the large number of fish. For each day, an equal number of fish from each treatment was sampled in random order and killed by a blow to the head. The fish were weighed, their fork length was measured and their sex was determined by macroscopical observation of their gonads. Liver samples were collected for several different studies (hence sample size limitations), frozen on dry ice and stored at -70°C until analysis. Homogenization of the frozen liver tissue was carried out using Tissuelyser (Qiagen, Hilden, Germany) and hepatic total RNA was extracted and purified using QIAcube and RNeasy® Plus Mini Kit (Qiagen). The RNA quantity and quality were assessed by spectrophotometric measurements with the Nanodrop 1000 (NanoDrop Technologies, Wilmington, DE). To ensure that no degradation had occurred, the isolated RNA was analyzed using Experion automated electrophoresis (Bio-Rad, Hercules, CA). A 15k rainbow trout gene expression microarray was designed for the RT analyzer platform (febit, Heidelberg, Germany) by using The Institute for Genomic Research (TIGR) Rainbow Trout Gene Index (RTGI) database version 7.0 (http://compbio.dfci.harvard.edu/tgi/). Details on the probe design strategy, but for eelpout (Zoarces viviparus), and transcript selection strategy are described elsewhere (Kristiansson et al., 2009; Cuklev et al., 2011). However, in the present study, singletons and non-annotated expressed sequence tags (ESTs) were replaced by newly well-annotated ESTs in rainbow trout. When available, transcripts at GenBank (http://www.ncbi.nlm.nih.gov/nucleotide) were used. In our lab, results from similar microarrays using the same platform have shown good correlation with quantitative polymerase chain reaction (qPCR) data (Gunnarsson et al., 2009b; Kristiansson et al., 2009; Cuklev et al., 2011; Lennquist et al., 2011). To reduce variation in estrogen-responsive genes, only males were used for the subsequent gene expression analyses. Biotinylated antisense RNA (aRNA) was synthesized using MessageAmp™ II-Biotin Enhanced Single Round aRNA Amplification Kit (Ambion®). The aRNA samples (20 µg) were vacuum dried in a vacuum centrifuge, dissolved in 10 µl water and fragmented according to the manufacturer’s protocol. The following steps described in this subchapter were all performed by febit. Oligonucleotide arrays were synthesized by photo-controlled in situ synthesis using the Geniom One system (febit). Each biochip consists of eight individually accessible micro channels, each of which is referred to as a microarray in this manuscript. Eight individual samples from each aquarium were included in the analysis. In total, 64 microarrays were analyzed. A customized protocol, described in detail elsewhere (Cuklev et al., 2011), was used for prehybridization and hybridization. All samples were randomly placed on the biochips, with one sample from each exposure on each biochip. Signals were detected using the internal CCD-camera system of the RT analyzer instrument (febit) and quantified using the Geniom Wizard software. Integration times were between 156 and 570 ms, determined automatically by the instrument software. All microarray data processing and statistical calculations were performed in R-2.12.2 (www.r-project.org; R Development Core Team, 2010). The quality of pre- and post normalized arrays was verified with box- and MA plots. The data analysis was performed in the R-package LIMMA (Smyth, 2005). Data were normalized using the ‘quantile’ method. Moderated t-statistics and adjusted p-values of differential expression were calculated using the empirical Bayes model....
  10. 61000 RGD

    Description: only 50% of their DNA fingerprint bands, whereas SS and SR shared about 80% of bands. Most authorities suggest that WKY alone is not a good control strain, and that for most comparative studies several normotensive strains should be used. There is an extensive literature on the characteristics of SHR. DeJong (1984) provides a useful comparative review of this and other hypertensive strains, and there are regular symposia on hypertensive rat strains (see J. Hypertension 4(suppl):S1-S541, 1986, and Jpn. Heart J. 28:567-648)....

  11. Sjögren's syndrome: minor salivary glands GEO

    ID: geo.datasets:GDS3940

    Description: degrees of inflammation from Sjögren's syndrome (SS) patients. SS is a chronic autoimmune disease targeting salivary and lacrimal exocrine glands. Results provide insight into the molecular mechanisms underly...

    Types: Expression profiling by array

    Instrument: GPL570

  12. Treatment of Incarcerated Women with Substance Use Disorder and Post-traumatic Stress Disorder in Providence, Rhode Island, 1999-2001 ICPSR

    ID: doi:10.3886/ICPSR03416.v1

    Description: feasibility, and acceptability of Seeking Safety (SS) treatment in a sample of incarcerated women with comorbid substance use disorder (SUD) and comorbid post-traumatic stress disorder (PTSD). Seeking Safety, a cognitive-behavioral psychoth...

    Creators: Zlotnick, Caron

  13. Renal function and dietary salt GEO

    ID: geo.datasets:GDS574

    Description: ssue from Sprague Dawley and Dahl salt sensitive (SS/Jr) rats fed 10 day diet of either 0.3% or 8.0% NaCl. Results provide insight into salt adaptation and pathogenesis of hypertension....

    Types: Expression profiling by array

    Instrument: GPL85

  14. Cigarette smoke and second-hand smoke effects on obese male hearts GEO

    ID: geo.datasets:GDS4799

    Description: 6 males exposed to mainstream (MS) or sidestream (SS) cigarette smoke. Smoking and obesity are risk factors for heart disease. Results provide insight into molecular mechanisms underlying cardiac responses of smoke-exposed DIO animals....

    Types: Expression profiling by array

    Instrument: GPL8321

  15. Cross-Border Multi-Jurisdictional Task Force Evaluation, San Diego and Imperial Counties, California, 2007-2012 ICPSR

    ID: doi:10.3886/ICPSR34904.v1

    Description:

    These data are part of NACJD's Fast Track Release and are distributed as they were received from the data depositor. The files have been zipped by...

    Creators: Burke, Cynthia Hoctor Mulmat, Darlanne Mino, Grace Chung, Grace Dunham, Jessica

    grant.identifiers: 2010-SS-B9-0001
  16. National Household Education Survey, 1993 ICPSR

    ID: doi:10.3886/ICPSR06877.v1

    Description: jor components. The School Safety and Discipline (SS&D) component (Part 1) gathered general perceptions of the school learning environment from students in grades 6 through 12 and parents/guardians of students in grades 3 through 12. Respondents were asked about academic challenge, classroom and school discipline, and student norms for hard work and good behavior. They also evaluated the safety of their schools regardless of whether they or their children had been personally victimized. This component incorporated a broad concept of victimization, including measures of "secondary victimization," such as knowledge of an...

    Creators: United States Department of Education. Institute of Education Sciences. National Center for Education Statistics

  17. Genomic Characterization of Metastatic Castration Resistant Prostate Cancer CEDAR

    Description: A multi-institutional consortium conducted a prospective IRB-approved study (NCT02432001) that obtained and profiled metastatic tumor biopsies from pr...

    access.landingPage: https://dbgap.ncbi.nlm.nih.gov/ss/dbgapss.cgi?study_id=30324

Displaying 20 of 1,657 results for "SHOX"