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  1. Ubiquitin-dependent turnover of MYC promotes loading of the PAF complex on RNA Polymerase II to drive transcriptional elongation OmicsDI

    ID: E-GEOD-70009

    Date Released: 01-09-2016

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  2. Expression data from Saccharomyces cerevisiae OmicsDI

    ID: E-GEOD-49025

    Date Released: 01-09-2016

    Description: In this study, we characterize the protein uptake and degradation pathways of S. cerevisiae to better understand its impact on protein secretion titer...

  3. Adult mouse cortical cell taxonomy by single cell transcriptomics OmicsDI

    ID: E-GEOD-71585

    Date Released: 01-09-2016

    Description: Nervous systems are composed of numerous cell types, but the extent of cell type diversity is poorly understood. Here, we construct a cellular taxonom...


    ID: E-MTAB-3201

    Date Released: 01-06-2016

    Description: Gene expression profiles of synovial biopsies and peripheral blood cells from Psoriatic Arthritis were compared to gene expression profiles of synovia...

  5. Effects of egg enrichment with glucocorticoid hormone, antagonist and receptor messenger in the modulation of gene expression in zebrafish (Danio reri... OmicsDI

    ID: E-GEOD-52398

    Date Released: 01-09-2016

    Description: Several studies have shown the presence of large reservoirs of maternally contributed liposoluble hormones in the yolk of mature teleost oocytes, such...

  6. MAGE-A1 Promotes Proliferation, Migration and Invasion of Human Melanoma Cells through RNA-SEQ Analysis via Affecting C-JUN-IL8-ARHGAP29 Network OmicsDI

    ID: E-GEOD-66859

    Date Released: 01-09-2016

    Description: To define the role of MAGE-A1 in melanoma growth and metastasis, we performed RNA-seq analysis on MAGE-A1 overexpression (OE) and knockdown (KD) model...

  7. Expression data from primary term human decidual cells treated with interleukin-1-beta for 6 hours. OmicsDI

    ID: E-GEOD-58220

    Date Released: 01-10-2016

    Description: Preterm birth is an important unsolved clinical problem. Despite advanced treatments, infants who survive prematurity remain at increased risk for pe...

  8. Transcription profiling by high throughput sequencing of maize third node in la1-ref mutant plants OmicsDI

    ID: E-MTAB-4196

    Date Released: 01-05-2016

    Description: The classical maize mutant lazy1 (la1), displayed prostrate growth with reduced shoot gravitropism. We compared the transcriptome profile of the third...

  9. Differentiation of human parthenogenetic pluripotent stem cells reveals multiple tissue and isoform specific imprinted transcripts OmicsDI

    ID: E-GEOD-65002

    Date Released: 01-10-2016

    Description: Parental imprinting results in a monoallelic parent-of-origin dependent gene expression. However, many imprinted genes identified by differential meth...

  10. SIRT6 regulates redox homeostasis in human mesenchymal stem cells by the transactivation of NRF2 OmicsDI

    ID: E-GEOD-64642

    Date Released: 01-09-2016

    Description: We investigated the effect of SIRT6-knockout on gene expression and H3K4me3 modification profile in human mesenchymal stem cells. RNAs isolated from S...

  11. Sweet corn: low- vs. high-yielding hybrids OmicsDI

    ID: E-GEOD-73435

    Date Released: 01-09-2016

    Description: Transcriptional profiling of sweet corn plant density (crowding stress) tolerance influencing yield. Tolerance to crowding stress has played a crucial...

  12. Analysis of gene expression in human Bronchial Alveolar Lavage Cell (BAL) cell pellets OmicsDI

    ID: E-GEOD-74986

    Date Released: 01-08-2016

    Description: Clinical subphenotypes of asthma are characterized by pathological, cellular, and molecular heterogeneity of the airway. Gene expression profiling of ...

  13. transcription profiling by array of Arabidopsis pam48 (mterf6-1) mutants OmicsDI

    ID: E-GEOD-75824

    Date Released: 01-08-2016

    Description: Of the members of mitochondrial transcription termination factors (mTERFs) found in metazoans and plants known to regulate organellar gene expression ...

  14. Transcription profiling by high throughput sequencing of rice leaf sheaths and roots from plants grown under N-deficient or N-sufficient conditions fo... OmicsDI

    ID: E-MTAB-4195

    Date Released: 01-05-2016

    Description: Nitrogen (N), a critical macronutrient for plant growth and development, is a major limiting factor in most agricultural systems. Microarray analyses ...

  15. Gene expression characterization of high and low grade clear cell renal cell carcinoma OmicsDI

    ID: E-GEOD-68417

    Date Released: 01-09-2016

    Description: Patients undergoing either partial or radical nephrectomy at William Beaumont Hospital (Royal Oak, MI) were consented prior to surgery with local IRB ...

  16. Expression data from seedligs of wild type tomato seedlings (control) and InsP 5-ptase tansgenic line (L7) exposed to light stress OmicsDI

    ID: E-GEOD-58521

    Date Released: 06-21-2015

    Description: Objectives for this study included the identification of genes that were up or down-regulated at the transcriptional level in tomato InsP 5-ptase tran...

  17. Gene Expression Profiles of Chicken Embryo Fibroblasts in Response to Salmonella Enteritidis Infection OmicsDI

    ID: E-GEOD-67459

    Date Released: 06-21-2015

    Description: The response of chicken to non-typhoidal Salmonella infection is becoming well characterised but the role of particular cell types in this response is...

  18. Gene Expression Profiling Of Spinal Cord Injured Patients With Intractable Neuropathic Pain OmicsDI

    ID: E-GEOD-69901

    Date Released: 06-21-2015

    Description: Objective: Chronic pain is a major problem in patients with spinal cord injury (SCI). According to different studies, approximately 70% of patients wi...

  19. Distinctive responses of Mycobacterium smegmatis to exposure of low and high levels of hydrogen peroxide OmicsDI

    ID: E-MTAB-3594

    Date Released: 06-22-2015

    Description: Log phase cultures (OD600 of 0.8 - 1.0) of M. smegmatis mc2155 were diluted 1:100 into 7H9 media and cultured for approximately 12 hours until the OD6...

  20. Genome wide binding sites of NsrR in uropathogenic E.coli CFT073 OmicsDI

    ID: E-GEOD-69829

    Date Released: 06-21-2015

    Description: We applied ChIP-seq to identify genome wide binding targets of NsrR in E.coli CFT073. NsrR is a nitric oxide sensitive regulator of transcription. Ge...

  21. Global DNA methylation landscape reveals roles of DNA methylation involved in the regulation of drug metabolizing enzyme [II] OmicsDI

    ID: E-GEOD-67477

    Date Released: 06-21-2015

    Description: In order to elucidate the role of DNA methylation in the DME gene regulation, global DNA methylation and mRNA expression profiles of human tissues and...

  22. The effects of leptin deficiency on cold-induced energy expenditure OmicsDI

    ID: E-GEOD-59517

    Date Released: 06-21-2015

    Description: At 24 °C Lep-/- mice are hyperphagic compared to the Lep+/+ mice. Reducing the ambient temperature from 24 to 6 °C (3 °C per day) was accompanied b...

  23. Discrete Functions of Rev-erba Couple Metabolism to the Clock [array] OmicsDI

    ID: E-GEOD-67964

    Date Released: 06-21-2015

    Description: Circadian and metabolic physiology are intricately intertwined, as illustrated by Rev-erb , a transcription factor (TF) that functions both as a core ...

  24. Regional differences in left ventricular shear stress contribute to heterogenity of the endocardial transcriptome OmicsDI

    ID: E-MTAB-3669

    Date Released: 06-24-2015

    Description: The role of shear stress, the frictional force of blood flow, on the endothelium has been well documented. Differences in shear stress can have profou...

  25. Association of DNA Methylation with Acute Mania and Inflammatory Markers OmicsDI

    ID: E-GEOD-68777

    Date Released: 06-27-2015

    Description: Genome wide DNA methylation profiling of serum samples from 20 individuals hospitalized with acute mania and 20 unaffected controls using the Illumina...

  26. Tracking the elusive function of Bacillus subtilis Hfq OmicsDI

    ID: E-GEOD-66893

    Date Released: 06-27-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  27. Transcription profiling of human adult peripheral vs cord blood mononuclear cells altered by lipopolysaccharide to understand the influence of early m... OmicsDI

    ID: E-GEOD-3140

    Date Released: 06-22-2015

    Description: Neonatal gram-negative sepsis is often characterized by a fulminat clinical course compared to adults resulting in higher morbidity and mortality. Gen...

  28. Human brown and white preadipocyes clonal dynamics predict themorgenic potential and function OmicsDI

    ID: E-GEOD-68544

    Date Released: 06-21-2015

    Description: Brown adipose tissue (BAT) holds therapeutic potential for obesity and metabolic syndrome via increasing energy expenditure. Both inter- and intra-ind...

  29. MicroRNAs of the RPE are essential for RPE differentiation and photoreceptor maturation OmicsDI

    ID: E-GEOD-69883

    Date Released: 06-21-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  30. Expression data from CD4+ naïve T cells under Treg-inducing condition in the presence or absence of butyrate OmicsDI

    ID: E-GEOD-48045

    Date Released: 06-21-2015

    Description: Commensal bacteria shape the gut immune system. Colonization bacteria increase the frequency of regulatory T cells, however, the molecular mechanisms ...

  31. Mouse lung tissue transcriptome response to H1N1, H5N1, and mutants [mRNA] OmicsDI

    ID: E-GEOD-69945

    Date Released: 06-20-2015

    Description: The purpose is to obtain samples for mRNA, miRNA, proteomics, lipidomics, metabolomics, and histopathology analysis in mouse lung infected with WT A/V...

  32. Ecological transcriptomics: a non-lethal sampling approach for endangered fire salamanders OmicsDI

    ID: E-GEOD-70054

    Date Released: 06-27-2015

    Description: The analysis of transcriptomes is well-established and increasingly affordable in studies at the interface of ecology and evolution. Expression analys...

  33. ncRNA (non-coding RNA) signature in endothelial cells during hypoxia OmicsDI

    ID: E-GEOD-70034

    Date Released: 06-26-2015

    Description: To define ncRNA expression in hypoxic endothelial cells, we applied pro-angiogenic hypoxia to cultured endothelial cells. Afterwards total RNA was iso...

  34. Expression data from AsPC1 cells treated with ICG-001 OmicsDI

    ID: E-GEOD-57728

    Date Released: 06-22-2015

    Description: The CREB binding protein inhibitor ICG-001 suppresses pancreatic cancer growth We used microarrays to detail global gene expression changes in the pan...

  35. Comparative trascriptomic analysis between early-blastocyst and Hatched blastocyst OmicsDI

    ID: E-GEOD-38882

    Date Released: 06-27-2015

    Description: Comparative trascriptomic analysis between porcine early-blastocyst and Hatched blastocyst collected around day 5-6 direct comparison with dye-swap; t...

  36. Differences in gene expression profiles between human preimplantation embryos cultured in two different IVF culture media OmicsDI

    ID: E-MTAB-3405

    Date Released: 07-24-2015

    Description: Study question: Is gene expression in human preimplantation embryos affected by medium used for culturing embryos during an IVF treatment? Summary an...

  37. Mapping the Regulatory Network for Salmonella Typhimurium Invasion OmicsDI

    ID: E-MTAB-3765

    Date Released: 07-21-2015

    Description: Using RNAseq, the goal of the study is to investigate transcription factor regulation of virulence genes in 14028s Salmonella Typhimurium grown in SPI...

  38. Integrative analysis of histone ChIP-seq and gene expression microarray data using Bayesian mixture models OmicsDI

    ID: E-GEOD-49975

    Date Released: 07-21-2015

    Description: Histone modifications are a key epigenetic mechanism to activate or repress the expression of genes. Data sets of matched microarray expression data a...

  39. Transcriptional Atlas of Cardiogenesis Maps Congenital Heart Disease Interactome OmicsDI

    ID: E-GEOD-51483

    Date Released: 07-23-2015

    Description: Mammalian heart development is built on highly conserved molecular mechanisms with polygenetic perturbations resulting in a spectrum of congenital hea...

  40. Transcription profiling of human A549 pneumocyte cells infected with wild type and type III secretion system mutants of Pseudomonas aeruginosa OmicsDI

    ID: E-GEOD-1469

    Date Released: 07-24-2015

    Description: The bacterial type III secretion system (TTSS) is dedicated to directly effect host cell pathways by pathogens. In order to identify the key host resp...

  41. Exposure to Cobalt Causes Transcriptomic and Proteomic Changes in Two Rat Liver Derived Cell Lines OmicsDI

    ID: E-GEOD-51207

    Date Released: 07-22-2015

    Description: Cobalt is a transition group metal present in trace amounts in the human diet, but in larger doses it can be acutely toxic or cause adverse health eff...

  42. Menin-regulated genes in bone marrow B-cell progenitors OmicsDI

    ID: E-GEOD-49120

    Date Released: 07-16-2015

    Description: MLL1 translocations encode fusion proteins retaining the N-terminus of MLL1, which interacts with the tumor suppressor, menin. This interaction is ess...

  43. Gene expression profile of C1013G/CXCR4 mutated WM cells OmicsDI

    ID: E-GEOD-50683

    Date Released: 07-20-2015

    Description: C1013G/CXCR4 variant has been inserted into BCWM.1 cells, and gene expression profile has been performed on the mutated cells and on the parental cell...

  44. Transcription profiling by array of heart tissues from rats with different duration of triiodothyronine (T3)-induced hyperthyroidism and from normal c... OmicsDI

    ID: E-MTAB-2029

    Date Released: 07-13-2015

    Description: Although it is well known that the thyroid hormone (T3) is an important positive regulator of cardiac function over a short-term and that it also prom...

  45. Gene expression in human umbilical cord vein and artery endothelial cells under physiological chronic normoxia (3% O2, PCN) and standard culture normo... OmicsDI

    ID: E-GEOD-49958

    Date Released: 07-20-2015

    Description: Endothelial cells, and many other types of cells too, physiologically reside in low O2 environments (~ 2-13% O2 or 15-60 mmHg pO2; [PCN]) relevantly t...

  46. Porcine gene response following incision with energized devices OmicsDI

    ID: E-GEOD-47710

    Date Released: 07-15-2015

    Description: This study compares the gene expression changes in Sus scrofa in response to two different methods for abdominal surgical incisions ; electrosurgery a...

  47. Chip-seq analysis of changes in SUMO-2 binding to chromatin in response to heat shock in human U2OS cells OmicsDI

    ID: E-MTAB-2368

    Date Released: 07-13-2015

    Description: Analysis of changes in SUMO-2 binding to chromatin in response to heat shock in human U2OS cells

  48. Differential gene expression in the Lacrimal gland during development and onset of xerostomia in Sjogren's syndrome-like disease of the C57BL/6.NOD-Ae... OmicsDI

    ID: E-GEOD-48139

    Date Released: 07-14-2015

    Description: Recently, we reported the development of the C57BL/6.NOD-Aec1Aec2 mouse that carries two genetic intervals derived from the NOD mouse capable of confe...

  49. Expression data from NOD and C57BL/6 mouse pancreas CD8α- Dendritic Cells (DCs) under steady-state and after in-vitro LPS stimulation OmicsDI

    ID: E-GEOD-45028

    Date Released: 07-09-2015

    Description: Abstract Two major dendritic cell (DC) subsets have been described in the islets of mice: The immunogenic CD8α-CD11b+ DCs and the tolerogenic CD8α+...

  50. Expression profiling of the retinal pigment epithelium in zebrafish smarca4 mutant OmicsDI

    ID: E-GEOD-50241

    Date Released: 07-21-2015

    Description: Purpose: The purpose of this study was to develop a framework for analyzing RPE expression profiles from zebrafish eye mutants. Methods: The fish mo...

Displaying 50 of 78,272 results for " "