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  1. Chromosomal analysis of products of conception OmicsDI

    ID: E-GEOD-39332

    Date Released: 08-19-2015

    Description: Results of an unbiased series of 2833 fresh products of conception samples (in conjunction with maternal blood samples for comparison) that were test...

  2. MicroRNA expression profiling of the prostate biopsy samples from African American and European American prostate cancer patients OmicsDI

    ID: E-GEOD-64318

    Date Released: 08-19-2015

    Description: Prostate cancer (PCa) tends to be more aggressive and lethal in African Americans (AA) compared to European Americans (EA). To further understand the ...

  3. Transcriptomic changes in aquaporin PIP1;2 deficient Arabodposis plants OmicsDI

    ID: E-GEOD-34984

    Date Released: 08-19-2015

    Description: The leaf transcriptome of the Arabidopsis thaliana aquaporin gene PIP1;2 T-DNA insertion line was compared to that of control plants. In total 730 gen...

  4. Fitness of natural Saccharomyces cerevisiae strains OmicsDI

    ID: E-GEOD-49551

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  5. RNA-Seq of cKIT+ sorted cells from 53-137 day old fetal testes and ovaries and RNA-Seq of TRA-1-81+ H1 and UCLA1 hESCs. OmicsDI

    ID: E-GEOD-63392

    Date Released: 08-19-2015

    Description: We performed RNA-Seq analyses on 15 human fetal samples at 53-137 days of development, 9 female and 5 male, and identified the transcriptional changes...

  6. Inflammatory environment and oxidized LDL convert circulating human proangiogenic cells (PACs) into functional antigen presenting cells (APCs) OmicsDI

    ID: E-GEOD-60208

    Date Released: 08-19-2015

    Description: The function of human circulating proangiogenic cells (PACs) has been described extensively. However, little focus has been placed on understanding ho...

  7. Identification and characterization of wilt and salt stress-responsive microRNAs from chickpea by high-throughput sequencing. OmicsDI

    ID: E-GEOD-57857

    Date Released: 08-19-2015

    Description: Purpose: To identify Fusarium wilt and salt-responsive miRNAs at genome wide level in Chickpea. Results: A total of 12,135,571 unique reads were obtai...

  8. Transcription factor Runx1 cooperates with MyoD and c-Jun to regulate the balance of myoblast proliferation/differentiation [ChIP-seq] OmicsDI

    ID: E-GEOD-56077

    Date Released: 08-19-2015

    Description: Runx1 is expressed in regenerating muscle, specifically in the muscle adult stem cells- the satellite cells. Its exact role and target genes were yet ...

  9. Functional and Transcriptomic Characterization of iPSC-derived Macrophages and their Application in Modeling Mendelian Disease OmicsDI

    ID: E-GEOD-55536

    Date Released: 08-19-2015

    Description: Using RNA-Seq, we reported novel findings in the comparison of transcriptome profiles of isogenic HMDM and IPSDM during differentiation and polarizati...

  10. Expression profile of primary and wound metastatic lesions of melanoma OmicsDI

    ID: E-GEOD-62837

    Date Released: 08-19-2015

    Description: The phenomenon that metastatic lesion developed on injured sites has long been recognized in a number of cancers, such as melanoma. The factors associ...

  11. Let-7 coordinately suppresses components of the amino acid sensing pathway to induce autophagy OmicsDI

    ID: E-GEOD-60452

    Date Released: 08-19-2015

    Description: Macroautophagy (hereafter autophagy) is the major pathway by which macromolecules and organelles are degraded. Autophagy is regulated by the mTOR sign...

  12. Characterizing the interactions between a naturally-primed IgA and its conserved Bacteroides thetaiotaomicron species-specific epitope in gnotobiotic ... OmicsDI

    ID: E-GEOD-65449

    Date Released: 08-19-2015

    Description: We report the mid-log phase transcriptional profile of the human gut symbiont Bacteroides thetaiotaomicron, grown in the presence of mouse monoclonal ...

  13. Gene expression profile (GEP) of myb-silenced CD34+ HPCs OmicsDI

    ID: E-GEOD-60299

    Date Released: 08-19-2015

    Description: The transcription factor cMyb plays a key role in human primary CD34+ hematopoietic progenitor cells (HPCs) lineage choice, by enhancing erythropoiesi...

  14. Bias in ligation-based small RNA sequencing library construction is determined by adaptor and RNA structure OmicsDI

    ID: E-GEOD-67053

    Date Released: 08-19-2015

    Description: High-throughput sequencing (HTS) has become a powerful tool for the detection of and sequence characterization of microRNAs (miRNA) and other small RN...

  15. Difference in gene expression between WT (Col-0) and atxrn4-3 mutant under non-stress and heat stress condition OmicsDI

    ID: E-GEOD-66369

    Date Released: 08-19-2015

    Description: Arabidopsis 5’-3’ exoribonuclease, AtXRN4, a homolog of yeast Xrn1p, functions in degradation of uncapped RNAs after de-capping step. While Xrn1p-...

  16. Brg1 Modulates Enhancer Activation and Polycomb-mediated Repression in Mesoderm Differentiation [ChIP-exo] OmicsDI

    ID: E-GEOD-63976

    Date Released: 08-19-2015

    Description: We investigated the genome-wide occupancy changes in normal and Brg1-deleted mesoderm differentiation of mouse embryonic stem cells of chromatin regul...

  17. Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort OmicsDI

    ID: E-GEOD-63063

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  18. Base-resolution detection of N4-methylcytosine in genomic DNA using 4mC-TAB-seq OmicsDI

    ID: E-GEOD-63371

    Date Released: 08-19-2015

    Description: N4-methylcytosine is a major DNA modification integral to restriction-modification (R-M) systems in bacterial genomes. Here we describe 4mC-Tet-Assist...

  19. A food deprivation affects the miRNome in the lactating goat mammary gland OmicsDI

    ID: E-GEOD-61025

    Date Released: 08-19-2015

    Description: Nutrition affects milk composition influencing its nutritional properties. Nutrition also modifies the expression of mammary genes, whose regulation i...

  20. Distinct regulatory programs for Sox9 in transcriptional regulation of the developing mammalian chondrocyte [RNA-seq] OmicsDI

    ID: E-GEOD-69110

    Date Released: 08-19-2015

    Description: We compared Sox9-association at chondrocyte targets to a broad catalogue of regulatory indicators of chromatin organization and transcriptional activi...

  21. Patterns of gene expression during Arabidopsis flower development from the time of initiation to maturation OmicsDI

    ID: E-GEOD-64581

    Date Released: 08-19-2015

    Description: Microarray timecourse experiments conducted across flower development from initiation of floral development to anthesis of the mature flower 3 replica...

  22. Identification of a novel insulin receptor-binding protein from Momordica charantia by transcriptomic, proteomic, and docking analyses OmicsDI

    ID: E-GEOD-39689

    Date Released: 08-19-2015

    Description: Momordica charantia (MC) is a common vegetable in tropical areas and has been used for a long time as an alternative therapy for diabetes. Although se...

  23. RGA binding sites in Arabidopsis thaliana seedlings OmicsDI

    ID: E-GEOD-59187

    Date Released: 08-19-2015

    Description: DELLA proteins act as hubs that relay environmental information to the multiple transcriptional circuits that control growth and development through p...

  24. Drop-Seq analysis of ERCC spike in capture OmicsDI

    ID: E-GEOD-66694

    Date Released: 08-19-2015

    Description: A bead supsension and a solution of ERCC spike-ins at a concentration of ~100,000 molecules per droplet was used in Drop-Seq, a novel technology for h...

  25. Androgen Receptor (AR) targets in a cell line from the mouse proximal caput epididymus OmicsDI

    ID: E-GEOD-38656

    Date Released: 08-19-2015

    Description: Sequence data represent a profile of AR network targets in proliferating and non-proliferating P17 cells without cross linking AR to DNA prior to puri...

  26. Allelic imbalance is a prevalent and tissue-specific feature of the mouse transcriptome OmicsDI

    ID: E-GEOD-58524

    Date Released: 08-19-2015

    Description: We perform a systematic classification of allelic imbalance in mouse hybrids derived from reciprocal crosses of divergent strains. We observe that dev...

  27. Gene expression profile in HCAECs transfected with RNF213 siRNA OmicsDI

    ID: E-GEOD-62348

    Date Released: 08-19-2015

    Description: We performed transcriptome analysis of HCAECs upon treatment with siRNF213 or with a control siRNA. Overall, a total of 217 genes were up-regulated (>...

  28. Wnt inhibitory factor 1 (WIF1) is a marker of osteoblastic differentiation stage and is not silenced by DNA methylation in osteosarcoma OmicsDI

    ID: E-GEOD-47572

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  29. Mcl-1 is a key determinant of breast cancer cell survival OmicsDI

    ID: E-GEOD-66072

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  30. Transcriptome comparison between Bacillus cereus ATCC 14579 wildtype (WT), RpoN (Sigma 54) deletion mutant and the complemented strain. OmicsDI

    ID: E-GEOD-65894

    Date Released: 08-19-2015

    Description: RpoN was shown to have a pleiotropic role in different microorganisms. This study was performed to elucidate role in B. cereus. In this study we compa...

  31. Transcriptome profiling of control and FOSL1 knockdown Rcho-1 trophoblast stem (TS) cells OmicsDI

    ID: E-GEOD-68272

    Date Released: 08-19-2015

    Description: In hemochorial placentation, trophoblast stem cells differentiate into multiple lineages to aquire specific functions, such as invasive and endocrine ...

  32. Disturbance of gene expression in primary human hepatocytes by hepatotoxic pyrrolizidine alkaloids: a whole genome transcriptome analysis OmicsDI

    ID: E-GEOD-69269

    Date Released: 08-19-2015

    Description: 1,2-unsaturated pyrrolizidine alkaloids (PA) are plant metabolites predominantly occurring in the plant families Asteraceae and Boraginaceae. Acute an...

  33. Transcriptomics and Metabolomics of 10 - 28 day post anthesis cotton fiber from Gossypium hirsutum and Gossypium barbadense OmicsDI

    ID: E-GEOD-64958

    Date Released: 08-19-2015

    Description: Purpose: The goal of this experiment was to use RNA-seq to compare the two commercial cotton species Gossypium hirsutum and Gossypium barbadense and d...

  34. Optimal codons in Tremella fuciformis end in C/G, a strong difference with known Tremella species OmicsDI

    ID: E-GEOD-68023

    Date Released: 08-19-2015

    Description: Tremella fuciformis is a popular edible fungus with fruiting bodies that can be produced in large quantities at low costs, while it is easy to trans...

  35. RNA sequencing analysis of miR-603 overexpression OmicsDI

    ID: E-GEOD-68987

    Date Released: 08-19-2015

    Description: Alzheimer’s disease (AD) is a serious neurodegenerative disease in which miRNAs have been linked to its pathogenesis. miR-603 is a primate-specific ...

  36. Genome-wide mapping of promoter-enhancer interactions with HiCap [HiCap] OmicsDI

    ID: E-GEOD-60494

    Date Released: 08-19-2015

    Description: Although the locations of promoters and enhancers have been identified in several cell types, we have yet limited information on their connectivity. W...

  37. Synergism of calcium sensing receptor and vitamin D receptor mediated signaling in epidermal differentiation [double KO] OmicsDI

    ID: E-GEOD-68725

    Date Released: 08-19-2015

    Description: Calcium and 1,25-dihydroxyvitamin D3 (1,25D3), through the actions of their respective receptors, the Ca2+-sensing receptor (CaSR) and the vitamin D r...

  38. Selection for improved energy efficiency and drought tolerance in canola results in distinct transcriptome and epigenome changes [ChIP-Seq] OmicsDI

    ID: E-GEOD-65571

    Date Released: 08-19-2015

    Description: Integrated breeding strategies are used to increase both the yield potential and stability of crops. Most of these approaches have a direct genetic b...

  39. Single-Cell Transcriptomics Reveals a Population of Dormant Neural Stem Cells that Become Activated upon Brain Injury OmicsDI

    ID: E-GEOD-67833

    Date Released: 08-19-2015

    Description: Heterogeneous pools of adult neural stem cells (NSCs) contribute to brain maintenance and regeneration after injury. The balance of NSC activation and...

  40. Gene expression profiling in synovial fluid derived stem cells (SFSCs) OmicsDI

    ID: E-GEOD-59642

    Date Released: 08-19-2015

    Description: To explore mRNA expression profiling in synovial fluid derived stem cells (SFSCs), gene expression analysis was performed on 3 SFSCs and 1 BMMSC. 3 sy...

  41. Omic Personality: The Longitudinal Consistency of Transcriptional, Epigenetic and Clinical Profiles [miRNA-Seq] OmicsDI

    ID: E-GEOD-67489

    Date Released: 08-19-2015

    Description: Background: Personalized medicine is predicated on the notion that individual biochemical and genomic profiles are relatively constant in times of g...

  42. microRNA and snoRNA expression profile in the solitary colorectal cancer OmicsDI

    ID: E-GEOD-68377

    Date Released: 08-19-2015

    Description: We evaluated the profile of miRNA and snoRNA expression in 7 solitary CRC and matched normal colorectal tissues using the Affymetrix GeneChip miRNA 1....

  43. Genome-wide OxyR and SoxRS transcriptional regulatory networks coordinate complex cellular responses to oxidative stress [RNA-seq] OmicsDI

    ID: E-GEOD-65711

    Date Released: 08-19-2015

    Description: Oxidative stress that originates from reactive oxygen species (ROS) is an inevitable consequence of aerobic respiration in bacteria. Three transcripti...

  44. Knockdown of LIVE1 in HUVEC compared to universal negative control OmicsDI

    ID: E-GEOD-53551

    Date Released: 08-19-2015

    Description: To profile changes in gene expression upon dsiRNA knockdown of LIVE1 lincRNA in HUVECs HUVECs were either subject to dsiRNA targeting LIVE1 or univers...

  45. MeCP2 binds to mCH as neurons mature, influencing transcription and onset of Rett syndrome [ChIP-Seq] OmicsDI

    ID: E-GEOD-66868

    Date Released: 08-19-2015

    Description: The postnatal neurodevelopmental disorder Rett syndrome (RTT) is caused by mutations in the gene encoding Methyl-CpG-binding Protein 2 (MeCP2). Despit...

  46. Expression data from NRK-52E cells treated with aristolochic acids for 6h, 24h and 72h OmicsDI

    ID: E-GEOD-68687

    Date Released: 08-19-2015

    Description: In this study we have examined the effect of sub-cytotoxic exposure to aristolochic acids (1.65µM) at 6h, 24h and 72h on the whole-genome expression ...

  47. Transcriptional reprogramming of engineered cellobiose-utilizing Saccharomyces cerevisiae in response to cellobiose revealed by RNA-Seq OmicsDI

    ID: E-GEOD-54825

    Date Released: 08-19-2015

    Description: Saccharomyces cerevisiae cannot metabolize cellobiose in nature. Here, S. cerevisiae was engineered to achieve cellobiose utilization by introducing b...

  48. Genome-wide mapping of Collier in vivo binding sites highlights its hierarchical position in different transcription regulatory networks OmicsDI

    ID: E-GEOD-67805

    Date Released: 08-19-2015

    Description: Collier, the single Drosophila COE (Collier/EBF/Olf-1) transcription factor, is required in several developmental processes, including head patterning...

  49. Deep sequencing analysis of microRNA expression in human melanocyte and melanoma cell lines OmicsDI

    ID: E-GEOD-66823

    Date Released: 08-19-2015

    Description: We investigated the miRNAome in human melanocyte and melanoma cell lines using high-throughput RNA sequencing. We identified a group of dysregulated m...

  50. Gene expression change in the cerebellum and prefrontal cortex of depression rats OmicsDI

    ID: E-GEOD-63377

    Date Released: 02-27-2015

    Description: The depressive-like behavior in animals is usually assessed by standardized behavioral tests such as the forced swimming test. However, the findings o...

  51. HuR- dependent regulation of mRNA splicing is essential for the B cell antibody response [RNA-Seq] OmicsDI

    ID: E-GEOD-62129

    Date Released: 02-21-2015

    Description: Post-transcriptional regulation of mRNA by the RNA binding protein HuR is required in B cells for the germinal centre reaction and for the production ...

  52. DNA methylation changes in fetal germ cells exposed to endocrine disruptors and in the next generation [methylation set 1] OmicsDI

    ID: E-GEOD-59539

    Date Released: 02-21-2015

    Description: According to recent reports, exposure to environmental endocrine disrupting chemicals (EDs) during pregnancy may harm multiple subsequent generations....

  53. Using the Porcine SNP60k array to discover copy number variations in high and low fertility boars OmicsDI

    ID: E-GEOD-66170

    Date Released: 02-28-2015

    Description: The raw data from the Porcine SNP60k array was used to discover copy number variations in high and low fertile breeding boars. Analysis was done in SN...

  54. Gene expression profiling of FFPE breast cancer samples [Illumina DASL WG platform] OmicsDI

    ID: E-GEOD-51451

    Date Released: 02-27-2015

    Description: The use of Affymetrix U133 2.0 Plus chips on FFPE samples when coupled with a qPCR-based sample pre-assessment step, yielded satisfactory results from...

  55. Transcriptome profiling reveals a genomewide role of G-proteins OmicsDI

    ID: E-GEOD-40217

    Date Released: 02-27-2015

    Description: Knock out mutants of GPA1 (gpa1-5), GCR1 (gcr1-5) as well as their double mutant (gpa1-5 gcr1-5) were used to obtain genomewide transcriptome profile ...

  56. Salt augments macrophage-driven host defense in the skin OmicsDI

    ID: E-MTAB-3343

    Date Released: 02-24-2015

    Description: Immune cells regulate a hypertonic microenvironment in the skin; however, possible functions of increased skin Na+ concentrations are unknown. We foun...

  57. Identification of a novel NF-kB target gene in human triple-negative breast cancer cells OmicsDI

    ID: E-GEOD-56812

    Date Released: 02-28-2015

    Description: Analysis of human triple-negative breast cancer cells (TNBCs) which have high NF-kB activity. Proteins derived from NF-κB target genes might be molec...

  58. Transcription profiling by array of neonatal rat cardiomyocytes stimulated by oncostatin M against untreated controls OmicsDI

    ID: E-MTAB-2560

    Date Released: 02-27-2015

    Description: Molecular analysis of transcriptional changes in cardiomyocytes induced by Oncostatin M treatment. The rationale of this experiment is described in [K...

  59. Genomic characterization of clones derived from a murine acute myeloid leukemia cell line for the description of genes involved in immunogenicity (dat... OmicsDI

    ID: E-GEOD-55353

    Date Released: 02-27-2015

    Description: The goal of this study was to determine the effects of gene deletions and duplications on acute myeloid leukemia cells immunogenicity. The Clones were...

  60. An anti-silencer- and SATB1-dependent chromatin hub regulates Rag1 and Rag2 gene expression during thymocyte development OmicsDI

    ID: E-GEOD-66248

    Date Released: 02-27-2015

    Description: Rag1 and Rag2 gene expression in CD4+CD8+ double positive (DP) thymocytes depends on the activity of a distant anti-silencer element (ASE) that counte...

  61. Transcription profiling by array of zebrafish mononuclear myogenic cells during myogenic differentiation OmicsDI

    ID: E-GEOD-19754

    Date Released: 09-08-2015

    Description: Analysis of the transcriptome of zebrafish mononuclear myogenic cells (zMNCs) during myogenic differentiation. The main goal is to identify the simila...

  62. Transcriptomic profiles of skin fibroblasts from patients affected by schizophrenia and controls OmicsDI

    ID: E-GEOD-62333

    Date Released: 02-21-2015

    Description: Whole-genome expression studies in peripheral tissues of patients affected by schizophrenia (SCZ) can provide new insights into the molecular basis of...

  63. Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos (MRE-seq) OmicsDI

    ID: E-GEOD-52704

    Date Released: 02-21-2015

    Description: DNA methylation undergoes dynamic changes during development and cell differentiation. Recent genome-wide studies discovered that tissue-specific diff...

  64. Defined conditions for the isolation and expansion of basal prostate stem cells of mouse and human origin [mouse] OmicsDI

    ID: E-GEOD-61860

    Date Released: 02-28-2015

    Description: Isolation and culture of primary prostate epithelial stem/progenitor cells (PESC) has been proven difficult and ineffective. Here we present methods t...

  65. Transcription profiling by array of a PaTu-8988s and PaTu-8988t cell line differentiation model OmicsDI

    ID: E-MTAB-3366

    Date Released: 02-26-2015

    Description: PaTu-8988s and PaTu-8988t are two cell lines which were derived from the same liver metastasis of a human primary pancreatic adenocarcinoma, but diffe...

  66. Effect of extracellular S100A4 on melanoma cells of different phenotypes OmicsDI

    ID: E-GEOD-65897

    Date Released: 02-21-2015

    Description: S100A4 is a known metastasis-promoting factor, rich in the tumor microenvironment. To clarify how extracellular S100A4 execute its pro-metastatic func...

  67. Comparison of cornea to the surface tissues, dermis and epidermis, in adult zebrafish OmicsDI

    ID: E-GEOD-24599

    Date Released: 02-21-2015

    Description: The gene expression profile of the adult zebrafish cornea was assessed in comparison to those from closely associated surface tissues: the dermis and ...

  68. Expression analysis of individual homoeologous wheat genome- and rye genome-specific transcripts in a 2BS.2RL wheat-rye translocation OmicsDI

    ID: E-GEOD-58678

    Date Released: 02-27-2015

    Description: To distinguish transcripts expressed from each of the three wheat genomes and those from the rye chromatins, genomic probes generated from diploid pro...

  69. Adult zebrafish: cornea vs epidermis OmicsDI

    ID: E-GEOD-24595

    Date Released: 02-21-2015

    Description: Transcriptional profiling of adult zebrafish cornea against epidermis as a reference. Four biological repeats with dye swap (2 chips of 4x44k for 8 da...

  70. Transcription profiling of human male vastus lateralis muscle samples from healthy and COPD subjects before and after 3 months of training OmicsDI

    ID: E-GEOD-1786

    Date Released: 09-07-2015

    Description: Needle biopsies were obtained from the vastus lateralis muscle of 6 healthy, sedentary, 67 +/- 2.5 year-old males before and after 3 months of trainin...

  71. Impacts of reprogramming method and culture conditions in trophoblast differentiation of induced pluripotent stem cells OmicsDI

    ID: E-GEOD-64272

    Date Released: 09-06-2015

    Description: Trophoblast differentiation from human ESC has been achieved by exposing the cells to BMP4 with or without supplementation of ALK4/5/7 inhibitor (A83-...

  72. Analysis of the gene expression profile in normal human epidermal keratinocytes and cutaneous squamous cell carcinoma cell lines OmicsDI

    ID: E-GEOD-66359

    Date Released: 09-06-2015

    Description: The incidence of keratinocyte-derived skin cancer, cutaneous squamous cell carcinoma (cSCC) is increasing worldwide making it the second most common m...

  73. Small RNA deep sequencing identifies viral microRNAs during malignant catarrhal fever induced by alcelaphine herpesvirus 1 OmicsDI

    ID: E-GEOD-71056

    Date Released: 09-06-2015

    Description: Alcelaphine herpesvirus 1 (AlHV-1) is a γ-herpesvirus (γ-HV) carried asymptomatically by wildebeest. Upon cross-species transmission, AlHV-1 induces...

  74. Dysregulation of the Transforming Growth Factor Beta Pathway in Induced Pluripotent Stem Cells Generated from Patients with Diamond Blackfan Anemia [H... OmicsDI

    ID: E-GEOD-70348

    Date Released: 09-06-2015

    Description: Diamond Blackfan Anemia (DBA) is an inherited bone marrow failure syndrome with clinical features of red cell aplasia and variable developmental abnor...

  75. PARP1- and CTCF-mediated interactions between active and repressed chromatin at the lamina promote oscillating transcription OmicsDI

    ID: E-GEOD-58534

    Date Released: 09-06-2015

    Description: Transcriptionally active and inactive chromatin domains tend to segregate into separate sub-nuclear compartments to maintain stable expression pattern...

  76. Environmentally Induced Epigenetic Transgenerational Inheritance of Altered SRY Genomic Binding During Gonadal Sex Determination OmicsDI

    ID: E-GEOD-72469

    Date Released: 09-06-2015

    Description: A critical transcription factor required for mammalian male sex determination is SRY (sex determining region on the Y chromosome). The expression of ...

  77. Comparison of gene expression between sams-1(RNAi) and sams-1(RNAi) animals rescued by choline OmicsDI

    ID: E-GEOD-70693

    Date Released: 09-06-2015

    Description: Gene expression was compared from adult C. elegans after RNAi Triplicate control RNAi (Empty vector), control RNAi, choline treated, sams-1(RNAi) and ...

  78. MDSC exacerbate acute hepatitis, mature and loose suppressor function CD40 dependent OmicsDI

    ID: E-GEOD-50949

    Date Released: 09-06-2015

    Description: Myeloid-derived suppressor cells (MDSC) represent a heterogeneous population of immature myeloid cells that accumulate in blood, liver, spleen and tum...

  79. Transcription Profiling of Malaria-Naïve and Semi-Immune Colombian Volunteers in a Plasmodium vivax Sporozoite Challenge [RNA-Seq] OmicsDI

    ID: E-GEOD-67184

    Date Released: 09-07-2015

    Description: We report two clusters in the overall profiles of expression among the samples. At the parasitemia onset, there is a strong interferon response reflec...

  80. Dynamic and coordinated expression changes of rice small RNAs in response to Xanthomonas oryzae pv. oryzae OmicsDI

    ID: E-GEOD-58385

    Date Released: 09-06-2015

    Description: Endogenous small RNAs are newly identified players in plant immune responses, yet their roles in rice (Oryza sativa) responding to pathogens are still...

  81. piRNA-guided slicing of transposon transcripts enforces their transcriptional silencing via specifying the nuclear piRNA repertoire OmicsDI

    ID: E-GEOD-71775

    Date Released: 09-06-2015

    Description: PIWI-clade Argonaute proteins silence transposon expression in animal gonads. Their target specificity is defined by bound ~23-30nt piRNAs that are pr...

  82. CLL exosomes modulate the transcriptome and behaviour of recipient stromal cells and are selectively enriched in miR-202-3p [mirBase 15] OmicsDI

    ID: E-GEOD-70995

    Date Released: 09-06-2015

    Description: Bi-directional communication with the microenvironment is essential for homing and survival of cancer cells with implications for disease biology and ...

  83. Transcription profiling of mouse treated with erythropoietin(EPO) and vehicle (VEH) after hypoxic-ischemic (HI) injury to gain insight into the mechan... OmicsDI

    ID: E-GEOD-1999

    Date Released: 09-08-2015

    Description: Hypoxic-ischemic (HI) injury in the developing brain is a common cause of disability in children, and there are no effective treatments at this time. ...

  84. Gene expression profiling of conditional ablation of Indian hedgehog in the mouse uterus OmicsDI

    ID: E-GEOD-19517

    Date Released: 09-08-2015

    Description: Conditional ablation of Indian hedgehog (Ihh) in the murine uterus results in mice that are sterile due to defects in embryo implantation. We perform...

  85. Expression data from undifferentiated human embryonic stem cells (hESC) and Day 3.5 mesodermal progenitor (CD326neg CD56+) population OmicsDI

    ID: E-GEOD-21668

    Date Released: 09-10-2015

    Description: Our understanding of how mesodermal tissue is formed, has been limited by the absence of specific and reliable markers of early mesoderm commitment. W...

  86. BCL6 is required for the initiation and maintenance of chronic myeloid leukemia OmicsDI

    ID: E-GEOD-26085

    Date Released: 09-10-2015

    Description: We identified the BCL6 protooncogene as a critical downstream effector of FoxO3A in self-renewal signaling of CML-initiating cells. BCL6 represses Arf...

  87. Transcription profiling by array of bovine adipose tissue pre- and post-partum OmicsDI

    ID: E-GEOD-21535

    Date Released: 09-10-2015

    Description: The objective was to study the transcriptomic changes in adipose tissue in the early stages of lactation, specifically in Bos Taurus, Holstein dairy c...

  88. Expression analysis of Antirrhinum majus inflorescence meristems grown under control and crowding conditions OmicsDI

    ID: E-GEOD-72818

    Date Released: 09-11-2015

    Description: Investigation of gene expression level changes as a result of crowding growth conditions. A five-chip study using total RNA recovered from samples of ...

  89. Breastfeeding infants transmit influenza virus to the mammary glands during feeding OmicsDI

    ID: E-GEOD-63084

    Date Released: 09-11-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  90. Gene expression profile of invasive and non-invasive esophageal squamous cell carcinoma cells OmicsDI

    ID: E-GEOD-21293

    Date Released: 09-09-2015

    Description: Human squamous cell cancers are the most common epithelially derived malignancies. One example is esophageal squamous cell carcinoma (ESCC), which is ...

  91. Transcription profiling by array of yeast to investigate expression of the beta-subunit of Snf1 kinase OmicsDI

    ID: E-GEOD-20591

    Date Released: 09-09-2015

    Description: The conserved Snf1/AMPK (AMP-activated protein Kinase) family is one of the central components in nutrient sensing and regulation of carbon metabolism...

  92. Transcription profilin by array of human CD34+ hematopoietic progenitor cells grown under different conditions OmicsDI

    ID: E-GEOD-20505

    Date Released: 09-10-2015

    Description: Gene transfer vectors based on gamma-retroviruses target actively transcribing genes indicating that the cellular gene expression profile can be predi...

  93. Prednisolone-induced differential gene expression in liver of mice carrying the wild type or a dimerization-defective glucocorticoid receptor OmicsDI

    ID: E-GEOD-21048

    Date Released: 09-10-2015

    Description: Glucocorticoids control expression of a large number of genes after binding to the glucocorticoid receptor (GR). Transcription may be regulated either...

  94. Gene expression profiling of parkinsonian substantia nigra OmicsDI

    ID: E-GEOD-20333

    Date Released: 09-10-2015

    Description: Affymetrix HG-Focus array was used to determine a global gene expression profile of clinically and neuropathologically confirmed cases of sporadic Par...

  95. Transcription profiling by array of human CD4 positive and CD8 positive T cells selected by positive or negative immunomagnetic cell selection OmicsDI

    ID: E-GEOD-14926

    Date Released: 09-07-2015

    Description: Negative immunomagnetic selection has become the method of choice for isolating T cell subsets for functional studies due to concerns that directly bi...

  96. Gene expression profile of lung epithelial cells cultured from normal tracheas of Gprc5a knockout and wild-type mice OmicsDI

    ID: E-GEOD-21309

    Date Released: 09-09-2015

    Description: Increasing the understanding of the impact of changes in oncogenes and tumor suppressor genes is essential for improving the management of lung cancer...

  97. Transcription profiling by array of Bos taurus endometrial biopsies OmicsDI

    ID: E-GEOD-20974

    Date Released: 09-10-2015

    Description: The aberrant gene expression in the uterine endometrium and embryo has been the major causes of pregnancy failure in cattle. Therefore, selecting cows...

  98. Rif1 binds to G-quadruplexes and suppresses replication over a long distances OmicsDI

    ID: E-GEOD-65293

    Date Released: 09-11-2015

    Description: Rif1 regulates replication timing and repair of double-stranded DNA breaks. Using Chromatin-immunoprecipitation-Sequencing method, we have identified ...

  99. Genome-wide analysis of colorectal cancer OmicsDI

    ID: E-GEOD-54986

    Date Released: 09-11-2015

    Description: Cancerous and paracancerous tissues of 6 cases having colorectal cancer were examined, such as up- or down-regulated specific cellular functions. To...

  100. Paracrine stimulation effect of autologous salispheres and human salispheres on mouse salivary gland OmicsDI

    ID: E-GEOD-72871

    Date Released: 09-11-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series


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