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  1. Transcriptomics analysis of CNOT6L KD LHCN cells compared to control OmicsDI

    ID: E-MTAB-3472

    Date Released: 12-04-2015

    Description: we transiently transfected LHCN cells (human skeletal myoblasts) with a CNOT6L-targeting siRNA or with an irrelevant siRNA as control. Cells were then...

  2. Systems analysis of uterine microenvironment in Treg depleted pregnant mice at 12 days after fertilization OmicsDI

    ID: E-GEOD-68432

    Date Released: 12-11-2015

    Description: Analysis of uterine microenvironment at gene expression level. The hypothesis tested in the present study was that Tregs orchestrated the immune repon...

  3. Expression data of mouse NIH3T3 and NIH3T3-k-ras transformed cell lines after Forskolin treatment OmicsDI

    ID: E-GEOD-68266

    Date Released: 12-08-2015

    Description: Forskolin treatment induces activation of protein kinase A. This activation protects transformed cells from death induced by glucose starvation. We us...

  4. A cross species and multi-omics (including metabolomics) analysis in pancreatic neuroendocrine tumours (tumor stages) OmicsDI

    ID: E-GEOD-73514

    Date Released: 12-08-2015

    Description: Pancreatic neuroendocrine tumor (PanNET) is relatively infrequent but is nevertheless metastatic. Seeking to extend a new paradigm of personalized med...

  5. Gene expression over the course of xylem tracheary element formation in cell suspension cultures of Arabidopsis thaliana OmicsDI

    ID: E-GEOD-73146

    Date Released: 12-10-2015

    Description: Transcriptomic analysis of gene expression during the differentiation of cell suspension cultures into tracheary elements using the biological system ...

  6. Identification of a potent and selective chemical probe for exploring the role of Mediator complex-associated protein kinases CDK8 and CDK19 in human ... OmicsDI

    ID: E-GEOD-67847

    Date Released: 12-08-2015

    Description: There is an unmet need for chemical tools to explore the role of the Mediator complex in human pathologies ranging from cancer to cardiovascular disea...

  7. Profile of mouse Lewis lung carcinoma LLC1 cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich extracellula... OmicsDI

    ID: E-GEOD-75864

    Date Released: 12-11-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  8. Transcription profiling by array of Saccharomyces cerevisiae in response to ethanol OmicsDI

    ID: E-MTAB-3874

    Date Released: 12-11-2015

    Description: The genome-wide transcriptional responses of the wild type laboratory strain, and two deletion strains (pmt7Δ/pmt7Δ and yhl042wΔ/yhl042wΔ) were co...

  9. Gene expression profile comparison of DC subsets OmicsDI

    ID: E-GEOD-75834

    Date Released: 12-11-2015

    Description: To evaluate gene expression profiles on different dendritic cell subsets isolated from spleens of mice We used whole genome microarrays to identify ge...

  10. Transcription profiling by array of serum mRNA in patients with head and neck squamous cell carcinoma OmicsDI

    ID: E-MTAB-1516

    Date Released: 12-09-2015

    Description: With the increasing demand for non-invasive approaches in monitoring of head and neck cancer, circulating nucleic acids have been shown to be a promis...

  11. Transcription profiling by array of Arabidopsis thaliana wild type and mutant genotypes ssi2, ssi2 act1 and ssi2 sid2. OmicsDI

    ID: E-GEOD-36797

    Date Released: 12-09-2015

    Description: Oleic acid-dependent modulation of Nitric Oxide Associated 1 protein levels regulate nitric oxide- mediate signaling in plant defense. Nitric Oxide, O...

  12. RNA-seq analysis of Bacteroides xylanisolvens XB1AT grown on pectin or xylan OmicsDI

    ID: E-GEOD-74379

    Date Released: 12-08-2015

    Description: Dietary fiber degradation is a key function of the human gut microbiota. The aim of this study was to increase our knowledge on the degradation of pl...

  13. Gene expression profiling of FOXP1-silenced diffuse large B-cell lymphoma (DLBCL) cell lines OmicsDI

    ID: E-GEOD-71526

    Date Released: 12-08-2015

    Description: To identify differentially expressed genes regulated by FOXP1 in DLBCL cells via gene expression profiling of GCB-DLBCL (DB, K422) and ABC-DLBCL (OCI-...

  14. Broiler responses to virulent and avirulent Clostridium perfringens OmicsDI

    ID: E-GEOD-70701

    Date Released: 12-08-2015

    Description: Purpose: Analyze gene expression during C. perfringens colonization in the chicken Transcriptomic profile of mRNA from C. perfrinegns from in vivo an...

  15. A MYC-driven change in mitochondrial dynamics limits stem cell properties of mammary epithelial cells (ChIP-seq) OmicsDI

    ID: E-GEOD-66252

    Date Released: 12-08-2015

    Description: In several developmental lineages, an increase in expression of the MYC proto-oncogene drives the transition from quiescent stem cells to transit ampl...

  16. Origin-Dependent Inverted-Repeat Amplification: Tests of a Model for Inverted DNA Amplification OmicsDI

    ID: E-GEOD-74443

    Date Released: 12-08-2015

    Description: DNA replication errors are a major driver of evolution—from single nucleotide polymorphisms to large-scale copy number variations (CNVs). Here we te...

  17. Transcription profiling of grapevine cell culture treated with methyly jasmonate, salicylic acids and ethanol controls OmicsDI

    ID: E-MEXP-1524

    Date Released: 12-07-2015

    Description: Calli generated from grape berries were used to establish a cell suspension in Gamborgs B5 liquid medium with minimal organics supplemented with 30 gL...

  18. Trans-effects of chromosome aneuploidies on DNA methylation patterns: DNA methylation analysis of Down syndrome in human brain tissues and cells OmicsDI

    ID: E-GEOD-74486

    Date Released: 12-08-2015

    Description: Background: Trisomy 21 causes Down syndrome (DS), but the mechanisms by which the extra chromosome leads to deficient intellectual and immune function...

  19. Transcript profiling of Arabidopsis msh1 mutants OmicsDI

    ID: E-GEOD-35893

    Date Released: 12-08-2015

    Description: The Arabidopsis msh1 mutant show various growth phenotype. We use microarray analysis to characterize gene expression pattern for two of the phenotype...

  20. Next Generation Sequencing identifies Cdh11 and Mrc1 as novel translational biomarkers of kidney fibrosis OmicsDI

    ID: E-GEOD-65267

    Date Released: 12-08-2015

    Description: Chronic kidney disease (CKD) is the gradual, asymptomatic loss of kidney function and current tests only identify it when significant loss has already...

  21. The imprinted Phlda2 gene modulates a major endocrine compartment of the placenta to regulate placental demands for maternal resources OmicsDI

    ID: E-GEOD-74318

    Date Released: 12-08-2015

    Description: Recent work suggests that imprinted genes may regulate the signalling function of the placenta by modulating the size of the endocrine compartment. Ou...

  22. Transcription factor trapping by RNA in gene regulatory elements OmicsDI

    ID: E-GEOD-68198

    Date Released: 12-08-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  23. Blood transcriptomics of drug-naïve sporadic Parkinson’s disease patients OmicsDI

    ID: E-GEOD-72267

    Date Released: 12-08-2015

    Description: Parkinson's disease (PD) is a chronic progressive neurodegenerative disorder that is clinically defined in terms of motor symptoms. These are preceded...

  24. Genome-wide analysis of high glucose and DZNep (EZH2 inhibitor) induced gene expression by mouse podocytes OmicsDI

    ID: E-GEOD-60038

    Date Released: 12-11-2015

    Description: Analysis of DZNep-induced gene expression changes in cultured podocytes. The hypothesis tested in the present study was that DZnep ultimately augments...

  25. Phosphorylation of an HP1-like protein regulates RNA-bridged heterochromatin body assembly for DNA elimination OmicsDI

    ID: E-GEOD-70083

    Date Released: 12-11-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  26. Drug-based modulation of endogenous stem cells promotes functional remyelination in vivo OmicsDI

    ID: E-GEOD-63804

    Date Released: 08-19-2015

    Description: Multiple sclerosis involves an aberrant autoimmune response and progressive failure of remyelination in the central nervous system. Prevention of neur...

  27. Genome-wide mapping of promoter-enhancer interactions with HiCap OmicsDI

    ID: E-GEOD-60495

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  28. Transcript profiles of juvenile female brown trout exposed to glyphosate and Roundup herbicides. OmicsDI

    ID: E-GEOD-56855

    Date Released: 08-19-2015

    Description: This study aimed to investigate the hepatic transcriptional response of brown trout to glyphosate, and its formulated product, Roundup. We exposed juv...

  29. Global identification of genes specific for rice meiosis OmicsDI

    ID: E-GEOD-66469

    Date Released: 08-19-2015

    Description: The leptotene-zygotene transition is a major step in meiotic progression during which pairing between homologous chromosomes is initiated and double s...

  30. A Global Transcriptome Analysis of BMSC from different confluences, But Gene Expression Profiling Suggested Comprised Pro-angiogenesis Effects - part ... OmicsDI

    ID: E-GEOD-60525

    Date Released: 08-19-2015

    Description: Ex vivo expansion of Bone Marrow Stromal Cells (BMSC) is required to obtain clinical dose for cellular therapy, and different labs use different confl...

  31. Genome-wide mapping of promoter-enhancer interactions with HiCap [RNA-seq] OmicsDI

    ID: E-GEOD-60493

    Date Released: 08-19-2015

    Description: Although the locations of promoters and enhancers have been identified in several cell types, we have yet limited information on their connectivity. W...

  32. CaMKII inhibition in smooth muscle cells controls Ang-II-induced gene transcription in the aorta OmicsDI

    ID: E-GEOD-64613

    Date Released: 08-19-2015

    Description: The Ca2+/calmodulin-dependent kinase II is expressed in smooth muscle and believed to mediate intracellular calcium handling and calcium-dependent gen...

  33. EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation [RNA-Seq] OmicsDI

    ID: E-GEOD-62056

    Date Released: 08-19-2015

    Description: Here we report the discovery of highly potent and selective EZH2 small molecule inhibitors, their validation by a cellular thermal shift assay, their ...

  34. Expression profile in Overexpression of GST,GST-Med3 OmicsDI

    ID: E-GEOD-65666

    Date Released: 08-19-2015

    Description: We have used microarrays to study the gene expression changes in Overexpression of GST,GST-Med3 of yeast cells to detect how the overexpressioin may ...

  35. Unexpected Inflammatory Effects of Intravaginal Gels (Universal Placebo Gel and Nonoxynol-9) on the Upper Female Reproductive Tract: an Experimental C... OmicsDI

    ID: E-GEOD-58090

    Date Released: 08-19-2015

    Description: Intravaginal HIV microbicides could provide women with a self-controlled means for HIV prevention, but results from clinical trials have been largely ...

  36. miR-7a is regulated in beta-cell dysfunction and couples early and late stages of pancreatic beta-cell differentiation to insulin secretion OmicsDI

    ID: E-GEOD-48195

    Date Released: 08-19-2015

    Description: Transcriptional and posttranscriptional regulatory networks play a crucial role in the maintenance and adaptation of pancreatic beta-cell function. In...

  37. Gene expression in undifferentiated or cyclic adenosine monophosphate-exposed BeWo trophoblast cells OmicsDI

    ID: E-GEOD-66840

    Date Released: 08-19-2015

    Description: BeWo trophoblast cells differentiate in response to expsure to cyclic adenosine monophosphate (cAMP) analogs. Differentiation includes syncytializatio...

  38. Leucegene: AML sequencing (part 4) OmicsDI

    ID: E-GEOD-66917

    Date Released: 08-19-2015

    Description: RNA sequencing of human leukemia The goals of this project are to obtain a comprehensive study of mutations and gene expression in human acute myeloid...

  39. Affymetrix SNP array data for rhabdomyosarcoma samples OmicsDI

    ID: E-GEOD-63891

    Date Released: 08-19-2015

    Description: Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from fresh frozen tissues. To obtain a profile of cop...

  40. A novel analytical brain block tool to enable functional annotation of discriminatory transcript biomarkers among discrete regions of the fronto-limbi... OmicsDI

    ID: E-GEOD-64797

    Date Released: 08-19-2015

    Description: We describe a novel method for obtaining discrete regions from the fronto-limbic circuits of a 4 year old and a 5 year old, male, intact, frozen non-h...

  41. High-throughput sequencing of mouse liver transcriptome. OmicsDI

    ID: E-GEOD-40190

    Date Released: 08-19-2015

    Description: Circadian profile of polyA RNA by RNA-Seq, collected from mouse liver at CT23, CT29, CT35, CT41, CT47, CT53, CT59, CT65. RNA from three livers pooled ...

  42. The carbonic anhydrase inhibitor ethoxzolamide inhibits the Mycobacterium tuberculosis PhoPR regulon and Esx-1 secretion and attenuates virulence OmicsDI

    ID: E-GEOD-63917

    Date Released: 08-19-2015

    Description: The purpose of this study was to examine how ethoxzolamide modulates gene M. tuberculosis gene expression at acidic pH. We observed that ethoxzolamide...

  43. Genome-wide DNA-binding profile of the Vibrio cholerae histone-like nucleoid structuring protein (H-NS) OmicsDI

    ID: E-GEOD-64249

    Date Released: 08-19-2015

    Description: The cholera disease bacterium V. cholerae, can adopt planktonic or biofilm lifestyles depending on the intracellular concentration of the second messe...

  44. Expression profiles of Ewing family of tumors authenticate distinct molecular entities OmicsDI

    ID: E-GEOD-60740

    Date Released: 08-19-2015

    Description: The concept of Ewing family of tumors (EFT), characterized by FET-ETS fusions, has been recently challenged by the description of Ewing-like tumors wi...

  45. miRNA and mRNA profiling of tumor-educated macrophages OmicsDI

    ID: E-GEOD-55024

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  46. Transcriptomic analysis of gastric cancer SGC-7901 cells in response to stable over-expression of intelectin 1 OmicsDI

    ID: E-GEOD-58962

    Date Released: 08-19-2015

    Description: Gastric cancer is one of the most common cancers worldwide, with approximately 1 million patients being diagnosed annually. Better elucidating the mec...

  47. Purification and transcriptomic analysis of mouse fetal Leydig cells reveals candidate genes for disorders of sex development OmicsDI

    ID: E-GEOD-65498

    Date Released: 08-19-2015

    Description: To examine the transcriptome of early testicular somatic cells during gonadogenesis at 12.5dpc RNA sequencing (RNA-Seq) was performed on murine primar...

  48. IL-8 Confers Acquired Resistance to EGFR Inhibitors through Regulating Stem Cell-like Properties in Lung Cancer OmicsDI

    ID: E-GEOD-60189

    Date Released: 08-19-2015

    Description: Previous study has demonstrated that PC9/gef cells are resistant to gefitinib-induced aspoptosis. To investigate the regulators contributed to gefitin...

  49. Small RNA mediated immune responses: insights from analyses of nine soybean R-gene near-isogenic lines and their susceptible parent OmicsDI

    ID: E-GEOD-56859

    Date Released: 08-19-2015

    Description: Small RNAs, including microRNAs (miRNAs) and small interfering RNAs (siRNAs) are negative regulators to target endogenous genes and repetitive sequenc...

  50. Effects of SUV39H1 depletion on gene expression in HeLa cells OmicsDI

    ID: E-GEOD-59243

    Date Released: 08-19-2015

    Description: HeLa cells were transiently transfected with siRNA against SUV39H1, a histone H3K9 methyltransferase. Several genes were significantly up- or down-reg...


Displaying 50 of 78,272 results for " "