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  1. Whole blood transcriptome analysis of Mycoplasma mycoides subsp, mycoides-infected cattle confirms immunosuppression but does not reflect local inflam... OmicsDI

    ID: E-GEOD-70059

    Date Released: 06-27-2015

    Description: In order to assess the use of whole blood transcriptome analysis to study cattle-Mmm interactions, we performed this study on 6 cattle, comparing the ...

  2. Therapeutic antiviral T cells noncytopathically clear persistently infected microglia after conversion into antigen-presenting cells OmicsDI

    ID: E-GEOD-66421

    Date Released: 06-27-2015

    Description: Several viruses can infect the mammalian nervous system and induce neurological dysfunction. Adoptive immunotherapy (AI) is an approach that involves ...

  3. Varicella-Zoster Virus (VZV) quiescent and productive infection of neurons derived from human embryonic stem cells OmicsDI

    ID: E-MTAB-3635

    Date Released: 06-22-2015

    Description: quiescent and productive infection of varicella zoster virus in human embryonic stem stem cell-derived neurons

  4. Identification of neurexophilin 3 as a novel maturation factor for induced pluripotent stem cell-derived dopaminergic neuron progenitors OmicsDI

    ID: E-GEOD-60080

    Date Released: 06-21-2015

    Description: To develop more potent cell transplantation therapy for neurodegenerative disorder such as Parkinson’s disease (PD), the condition of the host brain...

  5. A simple method for generating high-resolution maps of genome wide protein binding OmicsDI

    ID: E-GEOD-67454

    Date Released: 06-21-2015

    Description: Chromatin immunoprecipitation (ChIP) and its derivatives are the main techniques used to determine transcription factor binding sites. However, conven...

  6. Gene based expression changes in glioblastoma cells after downregulation of MPS1 kinase OmicsDI

    ID: E-GEOD-57091

    Date Released: 06-21-2015

    Description: Gene expression changes were analyzed in U251 GBM cells after downregulation of MPS1 by RNA interference technology at different time points Microarra...

  7. Human Bronchoalveolar Lavage Cells Gene Expression After Exposure to Increasing Doses of Ozone OmicsDI

    ID: E-GEOD-58682

    Date Released: 06-21-2015

    Description: Ozone, the major component of air pollution, is an oxidant gas. Inhalation of high ambient levels of ozone causes oxidative stress and airway inflamm...

  8. Gene expression profiles in dorsal skin of hairless mice orally administrated collagen hydrolysate OmicsDI

    ID: E-GEOD-62650

    Date Released: 06-21-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  9. Quiescence of Memory CD8+ T Cells Is Mediated by Regulatory T Cells through Inhibitory Receptor CTLA-4 OmicsDI

    ID: E-GEOD-67593

    Date Released: 06-21-2015

    Description: Immune memory cells are poised to rapidly expand and elaborate effector functions upon reinfection. However, despite heightened readiness to respond, ...

  10. The transcription factors SOX9 and SOX5/SOX6 cooperate genome-wide through super-enhancers to drive chondrogenesis (RNA-Seq) OmicsDI

    ID: E-GEOD-70142

    Date Released: 06-27-2015

    Description: SOX9 is a transcriptional activator required for chondrogenesis, and SOX5 and SOX6 are closely related DNA-binding proteins that critically enhance it...

  11. caArray_harri-00137: Predictors of Resistance to Preoperative Trastuzumab and Vinorelbine for HER2-Positive Early Breast Cancer OmicsDI

    ID: E-GEOD-70233

    Date Released: 06-26-2015

    Description: To assess pathologic complete response (pCR), clinical response, feasibility, safety, and potential predictors of response to preoperative trastuzumab...

  12. Comprehensive genomic analysis of relapse neuroblastoma [methylation] OmicsDI

    ID: E-GEOD-65306

    Date Released: 06-27-2015

    Description: Relapse neuroblastoma were characterized by sequencing, gene expression, arrayCGH and genome-wide methylation. This data set contains genome-wide meth...

  13. Microtubule Affinity-Regulating Kinase 2 is associated with DNA damage response and cisplatin resistance in non-small cell lung cancer. OmicsDI

    ID: E-GEOD-57966

    Date Released: 06-27-2015

    Description: MARK2 expression is associated with the malignant phenotype, expression of DNA repair components, NF-κB inhibition and cell cycle transcription facto...

  14. In vitro caloric restriction induces protective genes and functional rejuvenation in senescent SAMP8 astrocytes OmicsDI

    ID: E-GEOD-60388

    Date Released: 06-27-2015

    Description: Astrocytes are key cells in brain aging, helping neurons to undertake healthy aging or otherwise letting them enter into a spiral of neurodegeneration...

  15. Transcription profiling by array of liver tissues from wild type and Rev-erb{alpha} knockout (Nr1d1-/-) mice to study direct targets of Nr1d1 in rhyth... OmicsDI

    ID: E-GEOD-59460

    Date Released: 06-22-2015

    Description: Mammalian transcriptomes display complex circadian rhythms with multiple phases of gene expression that cannot be accounted for by current models of t...

  16. Role of macrophages in colitis OmicsDI

    ID: E-GEOD-68269

    Date Released: 12-11-2015

    Description: The goal of this project is to identify genes preferentially expressed in inflammatory macrophages as compared with control macrophages. inflammatory ...

  17. Transcriptomic gene profiling of porcine muscle tissue depending on histological properties OmicsDI

    ID: E-GEOD-75493

    Date Released: 12-12-2015

    Description: Purpose: Next-generation sequencing (NGS) was used to select genes potentially associated with fiber-type distribution and cell size in porcine muscle...

  18. TET-catalyzed 5-hydroxymethylcytosine regulates gene expression in differentiating colonocytes and colon cancer OmicsDI

    ID: E-GEOD-69333

    Date Released: 12-12-2015

    Description: 5-hydroxymethylcytosine (5-mC) and gene expression profiling of T84 cell differentiation; 5-hmC profiling of colon cancer colonocyte fractions T84 cel...

  19. C3A Cells: Exposure vs Control [one-channel arrays] OmicsDI

    ID: E-GEOD-75783

    Date Released: 12-12-2015

    Description: Gene expression profiles comparing FCCP, CCCP, Dinoterb, Benzoapyrene, TCP, Medium control, 0,1% DMSO in C3A cells C3A cells were exposed for 2 hours ...

  20. Expression data from lung tissues of minipig with left lung ischemia-reperfusion OmicsDI

    ID: E-GEOD-75560

    Date Released: 12-12-2015

    Description: Lung ischemia-reperfusion (I/R) injury remains one of the common complications after various cardiopulmonary surgeries. I-R injury represents one pote...

  21. miRNAs Expression of Mexican Patients with Breast Cancer OmicsDI

    ID: E-GEOD-75669

    Date Released: 12-12-2015

    Description: miRNAs expression of tumor sample of mexican patients with breast cancer. Samples obtained from the Hospital San Jose Tec de Monterrey. The experiment...

  22. Transcriptomics of circulating human eosinophils OmicsDI

    ID: E-GEOD-65239

    Date Released: 12-11-2015

    Description: Global expression pattern in eosinophils in various conditions such as eosinophilic asthma, hypereosinophilic dermatological diseases, parasitosis and...

  23. Molecular characterization of chronic antibody mediated rejection in kidney transplantation (mRNA) OmicsDI

    ID: E-GEOD-51675

    Date Released: 12-11-2015

    Description: Chronic antibody-mediated rejection (CAMR) represents the main cause of kidney graft loss, but its pathogenesis is unclear. In order to uncover the mo...

  24. Reconstruction of microRNA/genes transcriptional regulatory networks of multiple myeloma through in silico integrative genomics analysis [PCL, gene] OmicsDI

    ID: E-GEOD-73452

    Date Released: 12-12-2015

    Description: The identification of deregulated miRNA in multiple myeloma (MM) has progressively added a further level of complexity to MM biology. In the present s...

  25. Expression data on F0 and F1 strains of Pseudomonas aeruginosa OmicsDI

    ID: E-GEOD-75654

    Date Released: 12-12-2015

    Description: In our study, we seek to understand the differences in growth physiology between wild type P. aeruginosa PAO1 (F0 strain) and its PB1-phage resistant ...

  26. Next generation sequencing identifies differentially localized transcripts in Xenopus laevis and Xenopus tropicalis oocytes OmicsDI

    ID: E-GEOD-58420

    Date Released: 12-12-2015

    Description: RNA-seq technology was used to identify differentially localized transcripts from Xenopus laevis and Xenopus tropicalis stage VI oocytes. Besides the ...

  27. Expression data from low R:FR - SA crosstalk in Arabidopsis OmicsDI

    ID: E-GEOD-45728

    Date Released: 12-08-2015

    Description: Low R:FR signaling through phytochromes induces shade avoidance responses, including petiole elongation. Salicylic acid-mediated defense against patho...

  28. Gene expression profile of mouse Lewis lung carcinoma cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich e... OmicsDI

    ID: E-GEOD-75863

    Date Released: 12-11-2015

    Description: Obvious advantages of 3D cell culture model are the cell morphology better reflecting tissue cell morphology, the formation of zones of i) active prol...

  29. Peripheral blood mononuclear cells gene expression reflects adaptive response and metabolic damage associated to the intake of diets with an unbalance... OmicsDI

    ID: E-GEOD-54897

    Date Released: 12-12-2015

    Description: Gene expression studies in peripheral blood mononuclear cells (PBMC) can provide knowledge that would be difficult to obtain using other types of biol...

  30. Cryptococcus neoformans gene expression in minimal media of wild type (WT) and ALL2 mutant (all2Δ) cells OmicsDI

    ID: E-GEOD-74217

    Date Released: 12-12-2015

    Description: To examine the comparative transcription profile of WT and all2Δ mutant cells in in vitro conditions to determine genes responsible for hypervirulent...

  31. Double-stranded microRNA mimics can induce length- and passenger strand-dependent effects in a cell type-specific manner (RNA 2015), Exp 2 OmicsDI

    ID: E-GEOD-75801

    Date Released: 12-12-2015

    Description: Experiment 2 - MiRNA mimics have a length and passenger strand specific effect Wildtype and mutant variants of miR-155 and negative control miRNA mimi...

  32. Expression data from mouse neonatal hindlimb muscles OmicsDI

    ID: E-GEOD-75774

    Date Released: 12-12-2015

    Description: During neonatal development, skeletal muscle grows dramatically by myonuclei accretion to existing fibers and hypertophic growth of fibers with protei...

  33. De novo homozygous deletion of segmental KAL1 and entire STS cause Kallmann syndrome and X-linked ichthyosis in a Chinese family OmicsDI

    ID: E-GEOD-58793

    Date Released: 12-12-2015

    Description: Kallmann syndrome is a genetically heterogeneous condition and a treatable form of male infertility. Defects in KAL1 gene have been implicated in Kall...

  34. Global transcript analysis of quantitative trait loci (QTL) associated with meat tenderness in pigs OmicsDI

    ID: E-GEOD-75707

    Date Released: 12-12-2015

    Description: We sequenced mRNA from 32 muscles (n=16 semimembranosus,n=16 longisimus dorsi) of two pig breeds (Puławska and Polish Landrace), which are differing ...

  35. Revealing different roles of the mTOR-targets S6K1 and S6K2 in breast cancer by expression profiling and structural analysis OmicsDI

    ID: E-GEOD-75813

    Date Released: 12-12-2015

    Description: Expression profiles of ZR751 breast cancer cells after downregulation of S6K1, S6K2 and S6K1+S6K2. Triplicates of control, S6K1siRNA, S6K2siRNA and S6...

  36. Altered lipid metabolism in the aging kidney identified by three layered omic analysis OmicsDI

    ID: E-GEOD-74463

    Date Released: 12-08-2015

    Description: Aging-related diseases and their comorbidities affect the life quality of a constantly growing proportion of our population. Age-associated changes of...

  37. Discrimination of SIRS from Sepsis in Critically Ill Adults OmicsDI

    ID: E-GEOD-74224

    Date Released: 12-08-2015

    Description: Background: Systemic inflammation is a whole body reaction that can have an infection-positive (i.e. sepsis) or infection-negative origin. It is impor...

  38. UV-irradiation of skin enhances glycolytic flux in bone marrow-differentiated dendritic cells OmicsDI

    ID: E-GEOD-74468

    Date Released: 12-08-2015

    Description: Following UV irradiation of skin, dendritic cells (DCs) differentiating from the bone marrow (BM) of mice have a reduced ability to prime new immune r...

  39. Transcription profiling by array of Arabidopsis lug-3 mutant plants OmicsDI

    ID: E-GEOD-20227

    Date Released: 12-03-2015

    Description: Regulation of homeotic gene expression is critical for proper developmental patterns in plants. The Arabidopsis thaliana floral homeotic gene AGAMOUS ...

  40. Childhood Atopic Asthma OmicsDI

    ID: E-GEOD-65205

    Date Released: 12-03-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  41. Differential RNA-seq of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42 Reveals sRNA Bas01 involved in Sporulation and Biofilm Format... OmicsDI

    ID: E-GEOD-66681

    Date Released: 12-08-2015

    Description: Bacillus amyloliquefaciens FZB42 is a representative organism for Gram positive soil bacteria associated with plant roots and beneficial to plant grow...

  42. EIF4E AND EIF4GI HAVE DISTINCT AND DIFFERENTIAL IMPRINTS ON MULTIPLE MYELOMA'S PROTEOME AND SIGNALING OmicsDI

    ID: E-GEOD-62821

    Date Released: 12-08-2015

    Description: Accumulating data indicate translation plays a role in cancer biology, particularly its rate limiting stage of initiation. Despite this evolving recog...

  43. Opioid-induced gut microbial disruption leads to gut barrier compromise and sustained systemic inflammation. OmicsDI

    ID: E-MTAB-3722

    Date Released: 12-10-2015

    Description: Morphine and its pharmacological derivatives are the most prescribed analgesics for moderate to severe pain management. However, chronic use of morphi...

  44. Transcriptome analysis in rice smos1 mutant OmicsDI

    ID: E-GEOD-54357

    Date Released: 12-09-2015

    Description: In this study, we identified a new rice loss-of-function mutant, small organ size1 (smos1), that decreases the final size of various organs due to dec...

  45. Study of transcriptional effects of monosodium urate crystal (MSU) on HaCaT keratinocyte cell line. OmicsDI

    ID: E-GEOD-65931

    Date Released: 12-08-2015

    Description: Aim of the study was to characterize at a molecular level (changes in transcriptomes) the effect of monosodium urate crystal (MSU) on HaCaT keratinocy...

  46. Epigenome analysis of clear cell renal cell carcinoma (ccRCC) tissue versus matched normal kidney tissue OmicsDI

    ID: E-GEOD-61441

    Date Released: 12-08-2015

    Description: Genome wide DNA methylation profiling of clear cell renal cell carcinoma (ccRCC) tissue versus matched normal kidney tissue. The Illumina Infinium 4...

  47. A Comparative Analysis of Gene Expression Profiles During Skin Regeneration in Mus and Acomys OmicsDI

    ID: E-GEOD-74387

    Date Released: 12-08-2015

    Description: Acomys exhibits a blunted immune response to wounding, and shares characteristics with fetal wound healing We used mouse microarrays to compare gene e...

  48. Identifying Glioblastoma Gene Networks Based on Hypergeometric Test Analysis OmicsDI

    ID: E-GEOD-62731

    Date Released: 12-08-2015

    Description: Patient specific therapy is emerging as an important possibility for many cancer patients. However, to identify such therapies it is essential to det...

  49. Comparison of Nanostring nCounter data on FFPE colon cancer samples and Affymetrix microarray data on matched frozen tissues OmicsDI

    ID: E-GEOD-62932

    Date Released: 12-08-2015

    Description: The prognosis of colorectal cancer (CRC) stage II and III patients is still a challenge due to the difficulties of finding robust biomarkers and assay...

  50. Global Gene Expression Profiles of Fibroblasts from the Lungs of Patients with Idiopathic Pulmonary Fibrosis: The Role of CCL8 OmicsDI

    ID: E-GEOD-71351

    Date Released: 12-03-2015

    Description: Analysis of Idiopathic pulmonary fibrosis (IPF) at gene expression level. The hypothesis tested in the present study was that Epigenetic mechanisms ar...

  51. Transcriptomics analysis of CNOT6L KD LHCN cells compared to control OmicsDI

    ID: E-MTAB-3472

    Date Released: 12-04-2015

    Description: we transiently transfected LHCN cells (human skeletal myoblasts) with a CNOT6L-targeting siRNA or with an irrelevant siRNA as control. Cells were then...

  52. Systems analysis of uterine microenvironment in Treg depleted pregnant mice at 12 days after fertilization OmicsDI

    ID: E-GEOD-68432

    Date Released: 12-11-2015

    Description: Analysis of uterine microenvironment at gene expression level. The hypothesis tested in the present study was that Tregs orchestrated the immune repon...

  53. Expression data of mouse NIH3T3 and NIH3T3-k-ras transformed cell lines after Forskolin treatment OmicsDI

    ID: E-GEOD-68266

    Date Released: 12-08-2015

    Description: Forskolin treatment induces activation of protein kinase A. This activation protects transformed cells from death induced by glucose starvation. We us...

  54. A cross species and multi-omics (including metabolomics) analysis in pancreatic neuroendocrine tumours (tumor stages) OmicsDI

    ID: E-GEOD-73514

    Date Released: 12-08-2015

    Description: Pancreatic neuroendocrine tumor (PanNET) is relatively infrequent but is nevertheless metastatic. Seeking to extend a new paradigm of personalized med...

  55. Gene expression over the course of xylem tracheary element formation in cell suspension cultures of Arabidopsis thaliana OmicsDI

    ID: E-GEOD-73146

    Date Released: 12-10-2015

    Description: Transcriptomic analysis of gene expression during the differentiation of cell suspension cultures into tracheary elements using the biological system ...

  56. Identification of a potent and selective chemical probe for exploring the role of Mediator complex-associated protein kinases CDK8 and CDK19 in human ... OmicsDI

    ID: E-GEOD-67847

    Date Released: 12-08-2015

    Description: There is an unmet need for chemical tools to explore the role of the Mediator complex in human pathologies ranging from cancer to cardiovascular disea...

  57. Profile of mouse Lewis lung carcinoma LLC1 cell line cultivated in 2-dimensional or 3-dimensional cell culture enriched with laminin rich extracellula... OmicsDI

    ID: E-GEOD-75864

    Date Released: 12-11-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  58. Transcription profiling by array of Saccharomyces cerevisiae in response to ethanol OmicsDI

    ID: E-MTAB-3874

    Date Released: 12-11-2015

    Description: The genome-wide transcriptional responses of the wild type laboratory strain, and two deletion strains (pmt7Δ/pmt7Δ and yhl042wΔ/yhl042wΔ) were co...

  59. Gene expression profile comparison of DC subsets OmicsDI

    ID: E-GEOD-75834

    Date Released: 12-11-2015

    Description: To evaluate gene expression profiles on different dendritic cell subsets isolated from spleens of mice We used whole genome microarrays to identify ge...

  60. Transcription profiling by array of serum mRNA in patients with head and neck squamous cell carcinoma OmicsDI

    ID: E-MTAB-1516

    Date Released: 12-09-2015

    Description: With the increasing demand for non-invasive approaches in monitoring of head and neck cancer, circulating nucleic acids have been shown to be a promis...

  61. Transcription profiling by array of Arabidopsis thaliana wild type and mutant genotypes ssi2, ssi2 act1 and ssi2 sid2. OmicsDI

    ID: E-GEOD-36797

    Date Released: 12-09-2015

    Description: Oleic acid-dependent modulation of Nitric Oxide Associated 1 protein levels regulate nitric oxide- mediate signaling in plant defense. Nitric Oxide, O...

  62. RNA-seq analysis of Bacteroides xylanisolvens XB1AT grown on pectin or xylan OmicsDI

    ID: E-GEOD-74379

    Date Released: 12-08-2015

    Description: Dietary fiber degradation is a key function of the human gut microbiota. The aim of this study was to increase our knowledge on the degradation of pl...

  63. Gene expression profiling of FOXP1-silenced diffuse large B-cell lymphoma (DLBCL) cell lines OmicsDI

    ID: E-GEOD-71526

    Date Released: 12-08-2015

    Description: To identify differentially expressed genes regulated by FOXP1 in DLBCL cells via gene expression profiling of GCB-DLBCL (DB, K422) and ABC-DLBCL (OCI-...

  64. Broiler responses to virulent and avirulent Clostridium perfringens OmicsDI

    ID: E-GEOD-70701

    Date Released: 12-08-2015

    Description: Purpose: Analyze gene expression during C. perfringens colonization in the chicken Transcriptomic profile of mRNA from C. perfrinegns from in vivo an...

  65. A MYC-driven change in mitochondrial dynamics limits stem cell properties of mammary epithelial cells (ChIP-seq) OmicsDI

    ID: E-GEOD-66252

    Date Released: 12-08-2015

    Description: In several developmental lineages, an increase in expression of the MYC proto-oncogene drives the transition from quiescent stem cells to transit ampl...

  66. Origin-Dependent Inverted-Repeat Amplification: Tests of a Model for Inverted DNA Amplification OmicsDI

    ID: E-GEOD-74443

    Date Released: 12-08-2015

    Description: DNA replication errors are a major driver of evolution—from single nucleotide polymorphisms to large-scale copy number variations (CNVs). Here we te...

  67. Transcription profiling of grapevine cell culture treated with methyly jasmonate, salicylic acids and ethanol controls OmicsDI

    ID: E-MEXP-1524

    Date Released: 12-07-2015

    Description: Calli generated from grape berries were used to establish a cell suspension in Gamborgs B5 liquid medium with minimal organics supplemented with 30 gL...

  68. Trans-effects of chromosome aneuploidies on DNA methylation patterns: DNA methylation analysis of Down syndrome in human brain tissues and cells OmicsDI

    ID: E-GEOD-74486

    Date Released: 12-08-2015

    Description: Background: Trisomy 21 causes Down syndrome (DS), but the mechanisms by which the extra chromosome leads to deficient intellectual and immune function...

  69. Transcript profiling of Arabidopsis msh1 mutants OmicsDI

    ID: E-GEOD-35893

    Date Released: 12-08-2015

    Description: The Arabidopsis msh1 mutant show various growth phenotype. We use microarray analysis to characterize gene expression pattern for two of the phenotype...

  70. Next Generation Sequencing identifies Cdh11 and Mrc1 as novel translational biomarkers of kidney fibrosis OmicsDI

    ID: E-GEOD-65267

    Date Released: 12-08-2015

    Description: Chronic kidney disease (CKD) is the gradual, asymptomatic loss of kidney function and current tests only identify it when significant loss has already...

  71. The imprinted Phlda2 gene modulates a major endocrine compartment of the placenta to regulate placental demands for maternal resources OmicsDI

    ID: E-GEOD-74318

    Date Released: 12-08-2015

    Description: Recent work suggests that imprinted genes may regulate the signalling function of the placenta by modulating the size of the endocrine compartment. Ou...

  72. Transcription factor trapping by RNA in gene regulatory elements OmicsDI

    ID: E-GEOD-68198

    Date Released: 12-08-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  73. Blood transcriptomics of drug-naïve sporadic Parkinson’s disease patients OmicsDI

    ID: E-GEOD-72267

    Date Released: 12-08-2015

    Description: Parkinson's disease (PD) is a chronic progressive neurodegenerative disorder that is clinically defined in terms of motor symptoms. These are preceded...

  74. Genome-wide analysis of high glucose and DZNep (EZH2 inhibitor) induced gene expression by mouse podocytes OmicsDI

    ID: E-GEOD-60038

    Date Released: 12-11-2015

    Description: Analysis of DZNep-induced gene expression changes in cultured podocytes. The hypothesis tested in the present study was that DZnep ultimately augments...

  75. Phosphorylation of an HP1-like protein regulates RNA-bridged heterochromatin body assembly for DNA elimination OmicsDI

    ID: E-GEOD-70083

    Date Released: 12-11-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  76. Drug-based modulation of endogenous stem cells promotes functional remyelination in vivo OmicsDI

    ID: E-GEOD-63804

    Date Released: 08-19-2015

    Description: Multiple sclerosis involves an aberrant autoimmune response and progressive failure of remyelination in the central nervous system. Prevention of neur...

  77. Genome-wide mapping of promoter-enhancer interactions with HiCap OmicsDI

    ID: E-GEOD-60495

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  78. Transcript profiles of juvenile female brown trout exposed to glyphosate and Roundup herbicides. OmicsDI

    ID: E-GEOD-56855

    Date Released: 08-19-2015

    Description: This study aimed to investigate the hepatic transcriptional response of brown trout to glyphosate, and its formulated product, Roundup. We exposed juv...

  79. Global identification of genes specific for rice meiosis OmicsDI

    ID: E-GEOD-66469

    Date Released: 08-19-2015

    Description: The leptotene-zygotene transition is a major step in meiotic progression during which pairing between homologous chromosomes is initiated and double s...

  80. A Global Transcriptome Analysis of BMSC from different confluences, But Gene Expression Profiling Suggested Comprised Pro-angiogenesis Effects - part ... OmicsDI

    ID: E-GEOD-60525

    Date Released: 08-19-2015

    Description: Ex vivo expansion of Bone Marrow Stromal Cells (BMSC) is required to obtain clinical dose for cellular therapy, and different labs use different confl...

  81. Genome-wide mapping of promoter-enhancer interactions with HiCap [RNA-seq] OmicsDI

    ID: E-GEOD-60493

    Date Released: 08-19-2015

    Description: Although the locations of promoters and enhancers have been identified in several cell types, we have yet limited information on their connectivity. W...

  82. CaMKII inhibition in smooth muscle cells controls Ang-II-induced gene transcription in the aorta OmicsDI

    ID: E-GEOD-64613

    Date Released: 08-19-2015

    Description: The Ca2+/calmodulin-dependent kinase II is expressed in smooth muscle and believed to mediate intracellular calcium handling and calcium-dependent gen...

  83. EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation [RNA-Seq] OmicsDI

    ID: E-GEOD-62056

    Date Released: 08-19-2015

    Description: Here we report the discovery of highly potent and selective EZH2 small molecule inhibitors, their validation by a cellular thermal shift assay, their ...

  84. Expression profile in Overexpression of GST,GST-Med3 OmicsDI

    ID: E-GEOD-65666

    Date Released: 08-19-2015

    Description: We have used microarrays to study the gene expression changes in Overexpression of GST,GST-Med3 of yeast cells to detect how the overexpressioin may ...

  85. Unexpected Inflammatory Effects of Intravaginal Gels (Universal Placebo Gel and Nonoxynol-9) on the Upper Female Reproductive Tract: an Experimental C... OmicsDI

    ID: E-GEOD-58090

    Date Released: 08-19-2015

    Description: Intravaginal HIV microbicides could provide women with a self-controlled means for HIV prevention, but results from clinical trials have been largely ...

  86. miR-7a is regulated in beta-cell dysfunction and couples early and late stages of pancreatic beta-cell differentiation to insulin secretion OmicsDI

    ID: E-GEOD-48195

    Date Released: 08-19-2015

    Description: Transcriptional and posttranscriptional regulatory networks play a crucial role in the maintenance and adaptation of pancreatic beta-cell function. In...

  87. Gene expression in undifferentiated or cyclic adenosine monophosphate-exposed BeWo trophoblast cells OmicsDI

    ID: E-GEOD-66840

    Date Released: 08-19-2015

    Description: BeWo trophoblast cells differentiate in response to expsure to cyclic adenosine monophosphate (cAMP) analogs. Differentiation includes syncytializatio...

  88. Leucegene: AML sequencing (part 4) OmicsDI

    ID: E-GEOD-66917

    Date Released: 08-19-2015

    Description: RNA sequencing of human leukemia The goals of this project are to obtain a comprehensive study of mutations and gene expression in human acute myeloid...

  89. Affymetrix SNP array data for rhabdomyosarcoma samples OmicsDI

    ID: E-GEOD-63891

    Date Released: 08-19-2015

    Description: Affymetrix SNP arrays were performed according to the manufacturer's directions on DNA extracted from fresh frozen tissues. To obtain a profile of cop...

  90. A novel analytical brain block tool to enable functional annotation of discriminatory transcript biomarkers among discrete regions of the fronto-limbi... OmicsDI

    ID: E-GEOD-64797

    Date Released: 08-19-2015

    Description: We describe a novel method for obtaining discrete regions from the fronto-limbic circuits of a 4 year old and a 5 year old, male, intact, frozen non-h...

  91. High-throughput sequencing of mouse liver transcriptome. OmicsDI

    ID: E-GEOD-40190

    Date Released: 08-19-2015

    Description: Circadian profile of polyA RNA by RNA-Seq, collected from mouse liver at CT23, CT29, CT35, CT41, CT47, CT53, CT59, CT65. RNA from three livers pooled ...

  92. The carbonic anhydrase inhibitor ethoxzolamide inhibits the Mycobacterium tuberculosis PhoPR regulon and Esx-1 secretion and attenuates virulence OmicsDI

    ID: E-GEOD-63917

    Date Released: 08-19-2015

    Description: The purpose of this study was to examine how ethoxzolamide modulates gene M. tuberculosis gene expression at acidic pH. We observed that ethoxzolamide...

  93. Genome-wide DNA-binding profile of the Vibrio cholerae histone-like nucleoid structuring protein (H-NS) OmicsDI

    ID: E-GEOD-64249

    Date Released: 08-19-2015

    Description: The cholera disease bacterium V. cholerae, can adopt planktonic or biofilm lifestyles depending on the intracellular concentration of the second messe...

  94. Expression profiles of Ewing family of tumors authenticate distinct molecular entities OmicsDI

    ID: E-GEOD-60740

    Date Released: 08-19-2015

    Description: The concept of Ewing family of tumors (EFT), characterized by FET-ETS fusions, has been recently challenged by the description of Ewing-like tumors wi...

  95. miRNA and mRNA profiling of tumor-educated macrophages OmicsDI

    ID: E-GEOD-55024

    Date Released: 08-19-2015

    Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series

  96. Transcriptomic analysis of gastric cancer SGC-7901 cells in response to stable over-expression of intelectin 1 OmicsDI

    ID: E-GEOD-58962

    Date Released: 08-19-2015

    Description: Gastric cancer is one of the most common cancers worldwide, with approximately 1 million patients being diagnosed annually. Better elucidating the mec...

  97. Purification and transcriptomic analysis of mouse fetal Leydig cells reveals candidate genes for disorders of sex development OmicsDI

    ID: E-GEOD-65498

    Date Released: 08-19-2015

    Description: To examine the transcriptome of early testicular somatic cells during gonadogenesis at 12.5dpc RNA sequencing (RNA-Seq) was performed on murine primar...

  98. IL-8 Confers Acquired Resistance to EGFR Inhibitors through Regulating Stem Cell-like Properties in Lung Cancer OmicsDI

    ID: E-GEOD-60189

    Date Released: 08-19-2015

    Description: Previous study has demonstrated that PC9/gef cells are resistant to gefitinib-induced aspoptosis. To investigate the regulators contributed to gefitin...

  99. Small RNA mediated immune responses: insights from analyses of nine soybean R-gene near-isogenic lines and their susceptible parent OmicsDI

    ID: E-GEOD-56859

    Date Released: 08-19-2015

    Description: Small RNAs, including microRNAs (miRNAs) and small interfering RNAs (siRNAs) are negative regulators to target endogenous genes and repetitive sequenc...

  100. Effects of SUV39H1 depletion on gene expression in HeLa cells OmicsDI

    ID: E-GEOD-59243

    Date Released: 08-19-2015

    Description: HeLa cells were transiently transfected with siRNA against SUV39H1, a histone H3K9 methyltransferase. Several genes were significantly up- or down-reg...


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