biomedical and healthCAre Data Discovery Index Ecosystem
biomedical and healthCAre Data Discovery Index Ecosystem
Creator: TARGET
Disease: High-Risk Wilms Tumor
Primary Site: Kidney
Creator: TCGA
Disease: Uterine Carcinosarcoma
Primary Site: Uterus
Creator: TCGA
Disease: Thyroid Carcinoma
Primary Site: Thyroid
Creator: TCGA
Disease: Pancreatic Adenocarcinoma
Primary Site: Pancreas
Creator: TCGA
Disease: Skin Cutaneous Melanoma
Primary Site: Skin
Creator: TCGA
Disease: Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma
Primary Site: Cervix
Creator: TCGA
Disease: Kidney Renal Clear Cell Carcinoma
Primary Site: Kidney
Natural Variation in Fish Transcriptomes: Comparative Analysis of the Fathead Minnow (Pimephales promelas) and Zebrafish (Danio rerio) OmicsDI
ID: E-GEOD-60202
Date Released: 08-19-2015
Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Dazl is required for TET-mediated reprogramming to a naïve pluripotent state (I) OmicsDI
ID: E-GEOD-69055
Date Released: 08-19-2015
Description: Embryonic stem cell (ESC) cultures display a heterogeneous gene expression profile, ranging from a pristine naïve pluripotent state to a primed epibl...
Gata6 potently initiates reprogramming of pluripotent and differentiated cells to extraembryonic endoderm stem cells [time-course microarray] OmicsDI
ID: E-GEOD-69321
Date Released: 08-19-2015
Description: Transcription factor-mediated reprogramming is a powerful method to study cell fate changes. In this work, we demonstrate that the transcription facto...
E. histolytica and E. invadens OmicsDI
ID: E-GEOD-67232
Date Released: 08-19-2015
Description: This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Expression data from primary human mammary fibroblasts purified from disease-free women of low and high mammographic density OmicsDI
ID: E-GEOD-38506
Date Released: 08-18-2015
Description: Although high mammographic density (MD) is considered one of the strongest risk factors for invasive breast cancer, the genes involved in modulating t...
Gene expression profile of hemocytes from Manila clam (Venerupis philippinarum) after a Perkinsus olseni challenge using an immune-enriched oligo-micr... OmicsDI
ID: E-GEOD-59399
Date Released: 08-19-2015
Description: Parasites of the genus Perkinsus spp. cause high mortalities and economic losses to the most noticeable bivalves produced in the worldwide aquaculture...
A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (ChIP-Seq) OmicsDI
ID: E-GEOD-66297
Date Released: 08-19-2015
Description: Epigenetic dysregulation has emerged as an important mechanism in cancer. Alterations in epigenetic machinery have become a major focus for new targe...
Tbx3 controls Dppa3 levels to regulate exit from pluripotency towards mesodermal lineage OmicsDI
ID: E-GEOD-60066
Date Released: 08-19-2015
Description: Tbx3, a member of the T-box family, plays important roles in development, stem cells, nuclear reprogramming and cancer. Loss of Tbx3 induces different...
Aberrant ERK signaling causes resistance to EGFR kinase inhibitors OmicsDI
ID: E-GEOD-37699
Date Released: 08-18-2015
Description: The clinical efficacy of EGFR kinase inhibitors is limited by the development of drug resistance. The irreversible EGFR kinase inhibitor WZ4002 is eff...
Gene expression profiling of human Ewing sarcoma cells after knockdown of EGR2 or EWSR1-FLI1. OmicsDI
ID: E-GEOD-62090
Date Released: 08-19-2015
Description: To get insight in the functional role of EGR2 for Ewing sarcoma, we performed a transcriptional profiling of Ewing sarcoma cells after knockdown of EG...
Effect of type 2 diabetes on transcriptional signatures during exercise and recovery OmicsDI
ID: E-GEOD-59363
Date Released: 08-19-2015
Description: We performed gene expression microarray analysis of skeletal muscle biopsies from normal glucose tolerant subjects and type 2 diabetes subjects obtain...
Expression data analyzed with LPIA in A549 lung carcinoma cells treated with geldanamycin. OmicsDI
ID: E-GEOD-26525
Date Released: 08-11-2015
Description: The statsitcal model, latent pathway identification analysis (LPIA), was implemented for the analysis of A549 lung carcinoma cells treated with geldan...
Exon expression for NCI Sarcoma cell line panel OmicsDI
ID: E-GEOD-68591
Date Released: 08-19-2015
Description: Characterization of 68 cell lines derived from human sarcoma and 5 normal counterpart cells, including drug sensitivity testing, gene expression prof...