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Displaying 20 of 56 results for "TPM2"
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  1. TPM2_PODCA UniProt:Swiss-Prot

    ID: Q9U5M4

    Description: Tropomyosin-2

  2. DA1 NeuroMorpho.Org

    Type: image

    ID: 9943

  3. Sus scrofa : Sus scrofa Raw sequence reads BioProject

    ID: PRJNA344712

    Keywords: raw sequence reads

    Access Type: download

    dataset.description: cluding 35, 49, 63, 77 dpc (days post coitum) and 2, 28, 90, 180 dpn (days postnatal). As DE-miRNAs expression profiles can be well classified into two clusters by PCA analysis, we grouped embryonic stages as G1 and postnatal stages as G2. 203 genes were predicted by target of miRNAs and STEM analysis showed distinct expression patterns of both breeds between G1 and G2 based on their transcriptome data. Furthermore, 22 genes and 35 miRNAs were predicted with interaction relation by STRING, including some crucial myogenic factors (MEF2A, MEF2C, miR-206, miR-133b, etc.) and myofibrillar genes (MYH7, TPM2, DES, etc.). Thus, it can be reasonably speculate...
  4. DAR3_ARATH UniProt:Swiss-Prot

    ID: Q9LVR6

    Description: Protein DA1-related 3 Poly-Ala Poly-Ser

  5. N-terminal 98-aa fragment of smooth muscle tropomyosin beta PDB

    ID: PDB:3U59

    Description: Tropomyosin beta chain

  6. DAR6_ARATH UniProt:Swiss-Prot

    ID: Q9FJX8

    Description: Protein DA1-related 6 UIM 1 UIM 2 UIM 3 LIM zinc-binding Glu-rich

  7. Structure of the PDZ domain of human PDLIM2 bound to a C-terminal extension from human beta-tropomyosin PDB

    ID: PDB:2PA1

    Description: PDZ and LIM domain protein 2

  8. Bladder cancer microarrays ArrayExpress

    ID: E-GEOD-27448

    Description: 1 contained 32 DE genes, followed by chromosomes 2 and 11, which contained 25 and 23 DE genes, respectively. Chromosome 21 had the least number of DE genes. GO analysis revealed the prevalence of transport and binding genes in the common down-regulated DE genes; the prevalence of RNA metabolism and processing genes in the up-regulated DE genes; as well as the prevalence of genes responsible for cell communication and signal transduction in the DE genes that were down-regulated in T1-Grade III tumors and up-regulated in T2/T3-Grade III tumors. Combination of all available samples revealed 17 common genes (BMP4, CRYGD, DBH, GJB1, KRT83, MPZ, NHLH1, TACR3, ACTC1, MFAP4, SPARCL1, TAGLN, TPM2, CDC20, LHCGR, TM9SF1 and HCCS) four of which participate in numerous pathways. Conclusions/Significance: The identification of the common DE genes among BC samples of different histology can provide further insight into the discovery of new putative markers. Oligos microarray chips (~57k genes) were obtained from GE HealthCare (IL) and AppliedMicroarrays (MA) (former Amersham Biosciences) (CodeLink 57k Human Whole Genome). Hybridization was performed with the CodeLink RNA amplification and Labeling kit as described by the manufacturer, utilizing the Cy5 fluorescent dye. Slides were scanned with a microarray scanner (ScanArray 4000XL). Images were generated with ScanArray microarray acquisition software (GSI Lumonics, USA). cRNAs from three experimental setups were used in single experiments with internal spikes as controls. The experimental setups consisted of 10 urinary BC samples of different histology and 5 control samples. The scanned images were further processed with the CodeLink Expression Analysis Software v5.0 from Ame...

  9. Mouse Soleus Muscle Chronic Electrical Stimulation Study BioProject

    ID: PRJNA114467

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: sciatic nerve was used to induce contractions for 4 hours to investigate acute muscle gene activation in a model of muscle phenotype conversion. Initial force production (1.6 + 0.1 g/g body weight) declined 45% within 10 mi...
  10. Genotyping data from DA1 adults Dryad

    DateIssued: 04-22-2016

    Description: This spreadsheet has the genotyping results from 25 loci for crosses between SD females and AB males. Genotypes are as follows: (S-SD homozygote, SB-h...

  11. Mouse EDL Muscle Chronic Electrical Stimulation Study BioProject

    ID: PRJNA113819

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: by sciatic nerve stimulation (0.5 msec duration, 2-5 volts). The muscles were allowed to rest 15 minutes for full metabolic recovery at physiologic temperatures. Supramaximal stimulation was applied at a rate of 10 Hz for 4 hours. At the end of each experiment the extensor digitorum longus (EDL) muscles were carefully dissected and flash frozen in liquid nitrogen for analysis of mRNA expression via microarray analysis. The contralateral, unstimulated EDL provided a genetically matched, paired control for each specimen. Overal...
  12. Genotyping data from DA1 F2 nauplii Dryad

    DateIssued: 04-22-2016

    Description: This spreadsheet has the genotyping results from 25 loci for crosses between SD females and AB males. Genotypes are as follows: (S-SD homozygote, SB-h...

  13. Effect of neurotrophin p75 receptor (p75NTR) on angiogenesis ArrayExpress

    ID: E-GEOD-9910

    Description: (NTs) promotes angiogenesis and EC survival, via tropomyosin kinase trkA and trkB receptors. A different p75NTR receptor of NTs, which belongs to the TNF-alfa receptor superfamily, is not or sc...

  14. Effect of neurotrophin p75 receptor (p75NTR) on angiogenesis OmicsDI

    ID: E-GEOD-9910

    Date Released: 03-27-2012

    Description: (NTs) promotes angiogenesis and EC survival, via tropomyosin kinase trkA and trkB receptors. A different p75NTR receptor of NTs, which belongs to the TNF-alfa receptor superfamily, is not or sc...

  15. Transcription profiling of four mouse cell lines with mutations in the oncogenic tyrosine kinase gene BCR-Abl ArrayExpress

    ID: E-MEXP-772

    Description: Gene expression profile variation between 4 BCR-Abl transduced cell lines: 1-Mouse DA1-3b cell line as reference, 2-DR1 imatinib resi...

  16. Bladder cancer microarrays BioProject

    ID: PRJNA137077

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: 1 contained 32 DE genes, followed by chromosomes 2 and 11, which contained 25 and 23 DE genes, respectively. Chromosome 21 had the least number of DE genes. GO analysis revealed the prevalence of transport and binding genes in the common down-regulated DE genes; the prevalence of RNA metabolism and processing genes in the up-regulated DE genes; as well as the prevalence of genes responsible for cell communication and signal transduction in the DE genes that were down-regulated in T1-Grade III tumors and up-regulated in T2/T3-Grade III tumors. Combination of all available samples revealed 17 common genes (BMP4, CRYGD, DBH, GJB1, KRT83, MPZ, NHLH1, TACR3, ACTC1, MFAP4, SPARCL1, TAGLN, TPM2, CDC20, LHCGR, TM9SF1 and HCCS) four of which participate in numerous pathways. Conclusions/Significance: The identification of the common DE genes among BC samples of different histology can provide further insight into the discovery of new putative markers. Overall design: Oligos microarray chips (~57k genes) were obtained from GE HealthCare (IL) and AppliedMicroarrays (MA) (former Amersham Biosciences) (CodeLink 57k Human Whole Genome). Hybridization was performed with the CodeLink RNA amplification and Labeling kit as described by the manufacturer, utilizing the Cy5 fluorescent dye. Slides were scanned with a microarray scanner (ScanArray 4000XL). Images were generated with ScanArray microarray acquisition software (GSI Lumonics, USA). cRNAs from three experimental setups were used in single experiments with internal spikes as controls. The experimental setups consisted of 10 urinary BC samples of different histology and 5 control samples. The scanned images were further processed with the CodeLink Expression Analysis Softwa...
  17. Effect of neurotrophin p75 receptor (p75NTR) on angiogenesis BioProject

    ID: PRJNA103899

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: (NTs) promotes angiogenesis and EC survival, via tropomyosin kinase trkA and trkB receptors. A different p75NTR receptor of NTs, which belongs to the TNF-alfa receptor superfamily, is not or sc...
  18. Transcription profiling of four mouse cell lines with mutations in the oncogenic tyrosine kinase gene BCR-Abl OmicsDI

    ID: E-MEXP-772

    Date Released: 05-02-2014

    Description: Gene expression profile variation between 4 BCR-Abl transduced cell lines:
    1-Mouse DA1-3b cell line as reference,
    2-DR1 imati...

  19. The functional role of the binuclear metal center in D-aminoacylase. One-metal activation and second-metal attenuation PDB

    ID: PDB:1V4Y

    Description: D-aminoacylase (E.C.3.5.1.14)

    gene.name: DA1
  20. Structure of Vibrio cholerae chitin de-N-acetylase in complex with acetate ion (ACT) in C 2 2 21 PDB

    ID: PDB:4NYU

    Description: Deacetylase DA1 (E.C.3.5.1.41)


Displaying 20 of 56 results for "TPM2"