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Displaying 20 of 37 results for "SP6"
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  1. Streptococcus pyogenes SP6-LAU : Streptococcus pyogenes SP6-LAU Genome sequencing and assembly BioProject

    ID: PRJNA215883

    Keywords: Genome sequencing and assembly

    Access Type: download

  2. Streptococcus pneumoniae SP6-BS73 : Serotype 6A clinical isolate BioProject

    ID: PRJNA17959

    Keywords: Genome sequencing and assembly

    Access Type: download

  3. Solution structure of the estrogen receptor-binding stapled peptide SP6 (Ac-EKHKILXRLLXDS-NH2) PDB

    ID: PDB:2LDD

    Description: Estrogen receptor-binding stapled peptide SP6

  4. Microarray expression analysis in idiopathic and LRRK2-associated Parkinson's disease (PD) BioProject

    ID: PRJNA225814

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: ncompassed genes involved in neural functions and transcription factor functions whereas down-regulated DEGs (n=183) affected basic homeostasis. These data point towards the presence of gene - and also protein - expression changes in DAn from PD patients which co-occur simultaneously along with DNA methylation changes. Overall design: Number of samples analyzed: 14 iPSC-derived dopaminergic neurons . Control (C) samples, no pathological changes: SP9, SP11 SP15 SP17. Samples from idiopathic Parkinson's Disease (IPD) pat...
  5. Crystal structure of Type III Rubisco SP6 mutant complexed with 2-CABP PDB

    ID: PDB:3KDO

    Description: Ribulose bisphosphate carboxylase (E.C.4.1.1.39)

  6. Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway ArrayExpress

    ID: E-GEOD-65949

    Description: pathway. To examine the role of hOXR1 in global transcription regulation during cellular stress, we employed RNA sequencing to investigate the transcription profile in hOXR1 depleted HeLa cells. Methods: Control siRNA (siCon) and human OXR1 siRNA (siOXR1) transfected HeLa cells were either harvested directly (siCon_NT, siOXR1_NT) or exposed to 0.5 mM H2O2 for 1 h and then harvested immediately without recovery (siCon_R0h, siOXR1_R0h). Total RNA pooled from duplicate samples was used for RNA sequencing...

  7. PORTL_BPSP6 UniProt:Swiss-Prot

    ID: Q7Y5P0

    Description: Portal protein

    taxonomicInformation.name: Enterobacteria phage SP6
  8. EXLYS_BPSP6 UniProt:Swiss-Prot

    ID: Q7Y5N4

    Description: Peptidoglycan hydrolase gp36

    taxonomicInformation.name: Enterobacteria phage SP6
  9. RPOL_BPSP6 UniProt:Swiss-Prot

    ID: P06221

    Description: DNA-directed RNA polymerase

    taxonomicInformation.name: Enterobacteria phage SP6
  10. Genome-wide DNA methylation profiles of human hepatocellular carcinoma ArrayExpress

    ID: E-GEOD-44970

    Description: ecifically hypermethylated in HCC. Among them the transcription factors GATA2, DLX1, and KLF14, all significantly inversely correlated to gene expression (p=0.003, p=0.03, and p=0.007, respectively). The methylation status of SOCS2 (p=0.025) and DLX1 (p=0.025) was significantly correlated to phosphorylation of IGFR1. Samples with RBP1 hypermethylation showed significantly higher AFP serum levels (p=0.018). Conclusion: Whole genome methylation analysis markedly classifies normal, cirrhotic and HCC samples. 8 TSGs play a key role in this stepwise progression of hypermethylation in the development of HCC and could be a promising point of action in anticancer therapy. Genomic DNA extracted from fresh frozen tissue specimens and cell lines was hybridized to genome-wide mthylation beadarray after bisulphite treatment. Keywords: DNA methylation, hepatocellular carcinoma, tissue, cell line...

  11. Tiling path analysis of a library of transposon mutants generated in Salmonella enterica serovar Typhimurium strain SL1344 before and after infection ... ArrayExpress

    ID: E-MEXP-2076

    Description: Tn5 and Mu transposons with outward-facing T7 and SP6 promoters. The library was grown up in vitro, and used as the input pool for mouse infection experiments. An in vivo output pool was obtained from the mouse livers 2 days post-infection.Genomic DNA was extracted from the input and output pools...

  12. Transcriptome analysis of human OXR1 depleted cells reveals its role in regulating the p53 signaling pathway BioProject

    ID: PRJNA275502

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: pathway. To examine the role of hOXR1 in global transcription regulation during cellular stress, we employed RNA sequencing to investigate the transcription profile in hOXR1 depleted HeLa cells. Methods: Control siRNA (siCon) and human OXR1 siRNA (siOXR1) transfected HeLa cells were either harvested directly (siCon_NT, siOXR1_NT) or exposed to 0.5 mM H2O2 for 1 h and then harvested immediately without recovery (siCon_R0h, siOXR1_R0h). Total RNA pooled from duplicate samples was used for RNA sequencing...
  13. Genome-wide DNA methylation profiles of human hepatocellular carcinoma BioProject

    ID: PRJNA192663

    Keywords: Epigenomics

    Access Type: download

    dataset.description: ecifically hypermethylated in HCC. Among them the transcription factors GATA2, DLX1, and KLF14, all significantly inversely correlated to gene expression (p=0.003, p=0.03, and p=0.007, respectively). The methylation status of SOCS2 (p=0.025) and DLX1 (p=0.025) was significantly correlated to phosphorylation of IGFR1. Samples with RBP1 hypermethylation showed significantly higher AFP serum levels (p=0.018). Conclusion: Whole genome methylation analysis markedly classifies normal, cirrhotic and HCC samples. 8 TSGs play a key role in this stepwise progression of hypermethylation in the development of HCC and could be a promising point of action in anticancer therapy. Overall design: Genomic DNA extracted from fresh frozen tissue specimens and cell lines was hybridized to genome-wide mthylation beadarray after bisulphite treatment. Keywords: DNA methylation, hepatocellular carcinoma, tissue, cell line...
  14. Tiling path analysis of a library of transposon mutants generated in Salmonella enterica serovar Typhimurium strain SL1344 before and after infection ... OmicsDI

    ID: E-MEXP-2076

    Date Released: 05-02-2014

    Description: Tn5 and Mu transposons with outward-facing T7 and SP6 promoters. The library was grown up in vitro, and used as the input pool for mouse infection experiments. An in vivo output pool was obtained from the mouse livers 2 days post-infection.

    Genomic DNA was extracted from the input and outp...

  15. การพัฒนาระบบฐานข้อมูลการฝึกอบรมของสถาบันพัฒนาบุคลา... Dataverse

    Description: โปรแกรม Microsoft Visual Basic 6.0 (SP6) หลังจากนั้นจึงประเมินการใช้ระบบจากแบบสอบถามเจ้าหน้าที่ที่ใช้ระบบ จำนวน 20 คน การประเมินการใช้ระบบอยู่ในเกณฑ์ดี ทำให้ได้ระบบฐานข้อมูลการฝึกอบรมของสถาบันพัฒนาบุคลากรโรงพยาบาลและสาธารณสุข สำหรับใช้ในการจัดเก็บข้อมูลให้เป็นมาตรฐานเดียวกัน สามารถนำข้อมูลในระบบฐานข้อมูลมาใช้ประโยชน์ในการประมวลข้อมูลได้อย่างรวดเร็วและถูกต้อง อีกทั้งยังสามารถจัดทำรายงานต่างๆ เกี่ยวกับการดำเนินการฝึกอบรมต่อผู้บริหารได้อย่างมีประสิทธิภาพ...

    Person: นิศารัตน์ พรหมโชติ

    Release Date: 06-12-2011

  16. Oryza sativa : Oryza sativa Transcriptome or Gene expression BioProject

    ID: PRJNA138607

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: expression profile in osmads6-1 flowers at stage Sp6, unsing the wild type as control. Overall design: 6 samples: 3 osmads6-1 and 3 wild-type...
  17. Microarray data of genome-wide gene expression profile in osmads6-1 OmicsDI

    ID: E-GEOD-29349

    Date Released: 04-30-2015

    Description: expression profile in osmads6-1 flowers at stage Sp6, unsing the wild type as control. 6 samples: 3 osmads6-1 and 3 wild-type...

  18. Microarray data of genome-wide gene expression profile in osmads6-1 ArrayExpress

    ID: E-GEOD-29349

    Description: expression profile in osmads6-1 flowers at stage Sp6, unsing the wild type as control. 6 samples: 3 osmads6-1 and 3 wild-type...

  19. Aging-induced differential methylation in human PBMCs occurs with but often without change in expression of the associated gene (Expression) ArrayExpress

    ID: E-GEOD-49058

    Description: nd without transient induction with the synthetic transcription modulating agent WY14,643. To demonstrate feasibility of the approach, we isolated peripheral blood mononucleated cells (PBMCs) from five young and five old healthy male volunteers and cultured them with or without WY14,643. Infinium 450K BeadChip and Affymetrix Human Gene 1.1 ST expression array analysis revealed significant differential methylation of at least 5 % (ΔYO > 5 %) at 10,625 CpG sites between young and old subjects, but only a subset of the associated genes were also differentially expressed. Age-related differential methylation of previously reported ...

  20. Aging-induced differential methylation in human PBMCs occurs with but often without change in expression of the associated gene (DNA Methylation) ArrayExpress

    ID: E-GEOD-49064

    Description: nd without transient induction with the synthetic transcription modulating agent WY14,643. To demonstrate feasibility of the approach, we isolated peripheral blood mononucleated cells (PBMCs) from five young and five old healthy male volunteers and cultured them with or without WY14,643. Infinium 450K BeadChip and Affymetrix Human Gene 1.1 ST expression array analysis revealed significant differential methylation of at least 5 % (ΔYO > 5 %) at 10,625 CpG sites between young and old subjects, but only a subset of the associated genes were also differentially expressed. Age-related differential methylation of previously reported ...


Displaying 20 of 37 results for "SP6"