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Displaying 20 of 449 results for "SF3B1"
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  1. 2.5 angstrom resolution structure of the spliceosomal protein p14 bound to region of SF3b155 PDB

    ID: PDB:2F9D

    Description: Pre-mRNA branch site protein p14, Splicing factor 3B subunit 1...

  2. 3.0 angstrom resolution structure of a Y22M mutant of the spliceosomal protein p14 bound to a region of SF3b155 PDB

    ID: PDB:2F9J

    Description: Pre-mRNA branch site protein p14 (E.C.22M), Splicing factor 3B subunit 1...

  3. SF3B1 Degron knockdown RNA-seq OmicsDI

    ID: E-GEOD-66719

    Date Released: 03-21-2015

    Description: Knockdown of mutant and/or wild-type SF3B1 in MEL202 cell line by Degron knock-in, followed by RNA-seq, to identify splicing events governed by mutan...

  4. RNA sequencing of bone marrow CD34+ cells from myelodysplastic syndrome patients with and without SF3B1 mutation and from healthy controls OmicsDI

    ID: E-GEOD-63569

    Date Released: 11-30-2014

    Description: The splicing factor SF3B1 is the most commonly mutated gene in the myelodysplastic syndromes (MDS...

  5. SF3B1 association with chromatin determines splicing outcomes OmicsDI

    ID: E-GEOD-65644

    Date Released: 04-27-2015

    Description: ins unknown concerning the mechanism by which the splicing machinery pinpoints short exons within intronic sequences and how splicing factors are directed to their pre-mRN...

  6. Expression data from Sf3b1 heterozygous Lineage-c-Kit+Sca-1+ (LSK) bone marrow cells OmicsDI

    ID: E-GEOD-51038

    Date Released: 06-03-2014

    Description: s have shown that multiple components of the mRNA splicing machinery are mutated in myelodysplastic syndrome (MDS) patients. SF3B1 is frequently mutated in refractory anemia ...

  7. Transcriptome analysis of SF3B1-mutation induced changes in K562 cells OmicsDI

    ID: E-GEOD-70959

    Date Released: 07-15-2016

    Description: Seq, we determined changes to gene expression and splicing on inducible expression of SF3B1-WT and SF3B1-MUT (K700E) in K562 cells. Using RNA-Seq, we det...

  8. SF3B1 Degron knockdown RNA-seq BioProject

    ID: PRJNA277802

    Keywords: Transcriptome or Gene expression

    Access Type: download

  9. SF3b155 knock-down by two different siRNA oligos in HeLa cells ArrayExpress

    ID: E-GEOD-22952

    Description: lysis of the alternative pre-mRNA procesing after SF3b155 siRNA knock-down in HeLa cells employing a custom microarray platform sensitive to splicing. HeLa cells wer...

  10. Effect of SF3B1 suppression in cancer cells with different SF3B1 copy-number levels BioProject

    ID: PRJNA323711

    Keywords: Transcriptome or Gene expression

    Access Type: download

  11. SF3b155 knock-down by two different siRNA oligos in HeLa cells BioProject

    ID: PRJNA127923

    Keywords: Transcriptome or Gene expression

    Access Type: download

  12. leukemia (CLL) samples with wild type or mutated splicing factor SF3B1 against blood samples from healthy donors to study transcript isoform regulation associated with OmicsDI

    ID: E-MTAB-2025

    Date Released: 08-12-2015

    Description: onic lymphocytic leukemia (CLL) revealed that the splicing factor SF3B1 accumulated somatic point mutations in about 10 percent of the patients. In most cases the mutations were lo...

  13. Homo sapiens : SF3B1 SEQUENCING BioProject

    ID: PRJNA289525

    Keywords: raw sequence reads

    Access Type: download

  14. SF3B1 association with chromatin determines splicing outcomes BioProject

    ID: PRJNA274575

    Keywords: Other

    Access Type: download

  15. Homo sapiens : K562-SF3B1 BioProject

    ID: PRJNA289588

    Keywords: raw sequence reads

    Access Type: download

  16. Transcriptome analysis of SF3B1-mutation induced changes in K562 cells BioProject

    ID: PRJNA290019

    Keywords: Transcriptome or Gene expression

    Access Type: download

  17. Cancer associated SF3B1 hotspot mutations induce cryptic 3' splice site selection through use of a different branch point OmicsDI

    ID: E-GEOD-72790

    Date Released: 09-12-2015

    Description: onal and therapeutic significance remain elusive. SF3B1, the most frequently mutated component of the spliceosome in cancer, is involved in the recognition of the branch point sequence (BPS) during selection of the 3’ splice site (ss) in RNA splicing. H...

  18. SF3B1 Degron knockdown RNA-seq ArrayExpress

    ID: E-GEOD-66719

    Description: Knockdown of mutant and/or wild-type SF3B1 in MEL202 cell line by Degron knock-in, followed by RNA-seq, to identify splicing events governed by mutan...

  19. Gene expression influenced by SF3B1 inhibitor, FR901464 or SF3B1 gene mutations in colorectal cancer cells BioProject

    ID: PRJNA251682

    Keywords: Transcriptome or Gene expression

    Access Type: download

  20. Homo sapiens : SF3B1 mutations in Breast Cancer BioProject

    ID: PRJNA229096

    Keywords: transcriptome

    Access Type: download


Displaying 20 of 449 results for "SF3B1"