RBM11 | bioCADDIE Data Discovery Index
Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Displaying 20 of 41 results for "RBM11"
i
  1. Crystal structure of RRM-domain derived from human putative RNA-binding protein 11 PDB

    ID: PDB:2YWK

    Description: Putative RNA-binding protein 11

  2. A genome-wide map of CTCF multivalency redefines the CTCF code BioProject

    ID: PRJNA148151

    Keywords: Epigenomics

    Access Type: download

    dataset.description: se DNA sequences through combinatorial use of its 11 zinc fingers (ZFs). This model however is supported by in vitro binding studies of a limited number of sequences. To directly test CTCF multivalency in vivo we here define ZF binding requiremen...
  3. Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ OmicsDI

    ID: E-GEOD-39522

    Date Released: 05-03-2014

    Description: CTCF (CCCTC-binding factor) is a highly conserved 11-zinc finger DNA binding protein w...

  4. PRJNA126027 BioProject

    Access Type: download

    dataset.description: differentiation. We investigated the genome-wide binding profile of E2F4 using a newly developed peak calling program based on a kernel density estimation and identified approximately 16 thousands E2F4 binding sites at a 1% FDR threshold, which potentially modulate 7,346 downstream ta...
  5. Genomic targets of the KRAB and scan domain-containing zinc finger protein 263 (ZNF263). BioProject

    ID: PRJNA120697

    Keywords: Transcriptome or Gene expression

    Access Type: download

  6. Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ BioProject

    ID: PRJNA171029

    Keywords: Transcriptome or Gene expression

    Access Type: download

  7. The C. elegans SNAP complex component SNPC-4 coats piRNA domains and globally affects piRNA abundance ArrayExpress

    ID: E-GEOD-53412

    Description: se small RNAs. Here, we show that SNPC-4, the DNA-binding subunit of the small nuclear RNA activating protein complex (SNAPc), binds piRNA clusters in a germline-specific manner and is required for global piRNA expression in C. elegans. Within piRNA domains, SNPC-4 not only binds at discrete sites through its established sequence motif, but also exhibits widely distributed binding...

  8. LPPRC_XENTR UniProt:Swiss-Prot

    ID: Q28C74

    Description: Mitochondrion Leucine-rich PPR motif-containing protein, mitochondrial PPR 1 PPR 2 PPR 3 PPR 4 PPR 5 PPR 6 PPR 7 PPR 8 PPR 9 PPR 10 PPR

  9. The C. elegans SNAP complex component SNPC-4 coats piRNA domains and globally affects piRNA abundance BioProject

    ID: PRJNA232035

    Keywords: Other

    Access Type: download

    dataset.description: se small RNAs. Here, we show that SNPC-4, the DNA-binding subunit of the small nuclear RNA activating protein complex (SNAPc), binds piRNA clusters in a germline-specific manner and is required for global piRNA expression in C. elegans. Within piRNA domains, SNPC-4 not only binds at discrete sites through its established sequence motif, but also exhibits widely distributed binding...
  10. Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ ArrayExpress

    ID: E-GEOD-39522

    Description: CTCF (CCCTC-binding factor) is a highly conserved 11-zinc finger DNA binding protein w...

  11. Identification of Neuronal RNA Targets of TDP-43-Containing Ribonucleoprotein Complexes BioProject

    ID: PRJNA134765

    Keywords: Transcriptome or Gene expression

    Access Type: download

  12. Targets of the E. histolytica transcription factor URE3-BP ArrayExpress

    ID: E-GEOD-12188

    Description: brid screen of E. histolytica proteins capable of binding to the sequence TATTCTATT (URE3) in the promoter regions of hgl5 and fdx1. In this work precise definition of the consensus URE3 element was performed by electrophoretic mobility shift assays (EMSA) using base-substituted oligonucleotides, and the consensus motif validated using episomal r...

  13. Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ChIP-... ArrayExpress

    ID: E-GEOD-39502

    Description: CTCF (CCCTC-binding factor) is a highly conserved 11-zinc finger DNA binding protein w...

  14. Rocaglamide A converts RNA helicase eIF4A into a sequence-specific translational repressor ArrayExpress

    ID: E-GEOD-70211

    Description: Rocaglamide A (RocA) typifies a novel class of protein synthesis inhibitors that selectively kill aneuploid tumor cells and repress translation of specific mRNAs. RocA targets eu...

  15. Rocaglamide A converts RNA helicase eIF4A into a sequence-specific translational repressor OmicsDI

    ID: E-GEOD-70211

    Date Released: 06-18-2016

    Description: Rocaglamide A (RocA) typifies a novel class of protein synthesis inhibitors that selectively kill aneuploid tumor cells and repress translation of specific mRNAs. RocA targets eu...

  16. Differences in CTCF binding site sequence are associated with unique regulatory and functional trends during embryonic stem cell differentiation [ChIP-... BioProject

    ID: PRJNA171028

    Keywords: Epigenomics

    Access Type: download

  17. RDM1_DANRE UniProt:Swiss-Prot

    ID: Q5U3G4

    Description: RAD52 motif-containing protein 1 RRM

  18. Rocaglamide A converts RNA helicase eIF4A into a sequence-specific translational repressor BioProject

    ID: PRJNA287879

    Keywords: Other

    Access Type: download

  19. IF411_TOBAC UniProt:Swiss-Prot

    ID: Q40465

    Description: Eukaryotic initiation factor 4A-11 Helicase ATP-binding Helicase C-terminal ATP Q motif DEAD box...

  20. DDX25_BOVIN UniProt:Swiss-Prot

    ID: Q2TBP1

    Description: ATP-dependent RNA helicase DDX25 Helicase ATP-binding Helicase C-terminal ATP Nuclear export signal Q motif...


Displaying 20 of 41 results for "RBM11"