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Displaying 20 of 21 results for "MIAT"
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  1. Human gastric cancer_Tumor samples_Paired normal samples_10 replicates BioProject

    ID: PRJNA331142

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: is using tumor samples and paired normal samples. 66 lncRNAs were statistically dysregulated more than 2-fold. Overall design: The samples were divided into two groups, paired normal samples (negative control group_Rep10) and tumor samplea (Experiment group_Rep10)....
  2. Human gastric cancer_Tumor samples_Paired normal samples_10 replicates ArrayExpress

    ID: E-GEOD-84787

    Description: is using tumor samples and paired normal samples. 66 lncRNAs were statistically dysregulated more than 2-fold. The samples were divided into two groups, paired normal samples (negative control group_Rep10) and tumor samplea (Experiment group_Rep10)....

  3. Transcriptional profiling of lncRNAs and novel transcribed regions across a diverse panel of archived human cancers ArrayExpress

    ID: E-GEOD-28866

    Description: for improving tumor classification and diagnosis. Long non-coding RNAs (lncRNAs), as a new, relatively unstudied class of transcripts, provide a rich opportunity to identify both functional drivers and cancer-type specific biomarkers. However, despite ...

  4. Cas9 gRNA engineering for selectable genome editing, activation and repression ArrayExpress

    ID: E-GEOD-70694

    Description: RNA-Seq after Cas9-gRNA transfection with different length gRNAs we performed PolyA Selection and RNA-Seq on cel...

  5. Cas9 gRNA engineering for selectable genome editing, activation and repression BioProject

    ID: PRJNA289388

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: RNA-Seq after Cas9-gRNA transfection with different length gRNAs Overall design: we performed PolyA Selection and RNA
  6. Transcriptional profiling of lncRNAs and novel transcribed regions across a diverse panel of archived human cancers BioProject

    ID: PRJNA140583

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: for improving tumor classification and diagnosis. Long non-coding RNAs (lncRNAs), as a new, relatively unstudied class of transcripts, provide a rich opportunity to identify both functional drivers and cancer-type specific biomarkers. However, despite ...
  7. A genomic screen for long noncoding RNA genes epigenetically silenced by aberrant DNA methylation in colorectal cancer BioProject

    ID: PRJNA301997

    Keywords: Transcriptome or Gene expression

    Access Type: download

  8. Cas9 gRNA engineering for selectable genome editing, activation and repression OmicsDI

    ID: E-GEOD-70694

    Date Released: 09-07-2015

    Description: RNA-Seq after Cas9-gRNA transfection with different length gRNAs we performed PolyA Selection and RNA-Seq on cel...

  9. Genome-wide mRNA expression in human glioblastoma cells and glioblastoma stem cells expressing or not Omomyc BioProject

    ID: PRJNA342117

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: uppression and differentiation such as PTEN, ID4, MIAT, and modulation of the expression of microRNAs that target molecules implicated in glioblastoma growth and invasion like EGFR and ZEB1. Data support a novel view of MYC as a network stabiliser that strengthens the regulatory nodes of the gene expression programs controlling cell phenotype and highlight Omomyc as model molecule for targeting cancer stem cells. Overall design: We employed patient-derived glioblastoma stem cells BT168 harboring a Doxycycline-inducible FLAG-Omomyc construct (FO), to study mRNA expression in the presence or absence of Omomyc. RNAs prepared from cells treated or not with DOX for up to 48 hours were sequenced by Illumina HiSeq 2000 and 2500 platforms. The study includes 29 samples....
  10. Genome-wide chromatin binding of MYC, Omomyc, RNA polymerase II (Pol II), and Pol II Ser-2p in human glioblastoma cells and glioblastoma stem cells expressing or not Omomyc... BioProject

    ID: PRJNA342118

    Keywords: Epigenomics

    Access Type: download

  11. Human primary and secondary glioblastoma vs. non-neoplastic adult brain tissue ArrayExpress

    ID: E-GEOD-13030

    Description: s (miRNAs) are small (21-25 nucleotide in length) non-coding RNA molecules that negatively regulate protein expression. They are lin...

  12. Transcriptome Sequencing During Mouse Brain Development Identifies Long Non-Coding RNAs Functionally Involved in Neurogenic Commitment OmicsDI

    ID: E-GEOD-51606

    Date Released: 06-03-2014

    Description: Transcriptome sequencing revealed numerous novel long non-coding (lnc)RNAs and uncharacterized protein-coding transcripts identifying the signature of neurogenic commitment. Importantly, most lncRNAs overlapped neurogenic genes and shared with them a nearly identical expression pattern suggesting that lncRNAs control corticogenesis by tuning the expression of nearby cell fate determinants. We assessed the power of our approach by manipulating lncRNAs and protein-coding

  13. Human primary and secondary glioblastoma vs. non-neoplastic adult brain tissue OmicsDI

    ID: E-GEOD-13030

    Date Released: 05-04-2014

    Description: s (miRNAs) are small (21-25 nucleotide in length) non-coding RNA molecules that negatively regulate protein expression. They are lin...

  14. Human primary and secondary glioblastoma vs. non-neoplastic adult brain tissue BioProject

    ID: PRJNA109701

    Keywords: Transcriptome or Gene expression

    Access Type: download

  15. Saccharomyces cerevisiae : XUT, a novel class of antisense regulatory ncRNA in yeast BioProject

    ID: PRJNA79991

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: Non-coding (nc)RNAs are key players in numerous biological processes such as gene regulation, chromatin domain f...
  16. The DMD locus harbours multiple long non-coding RNAs which orchestrate and control transcription of muscle dystrophin mRNA isoforms ArrayExpress

    ID: E-GEOD-27068

    Description: The 2.2 Mb long dystrophin (DMD) gene, the largest gene in the human genome, corresponds to roughly 0.1% of the entire human DNA sequence. Mut...

  17. Transcriptome Sequencing During Mouse Brain Development Identifies Long Non-Coding RNAs Functionally Involved in Neurogenic Commitment ArrayExpress

    ID: E-GEOD-51606

    Description: Transcriptome sequencing revealed numerous novel long non-coding (lnc)RNAs and uncharacterized protein-coding transcripts identifying the signature of neurogenic commitment. Importantly, most lncRNAs overlapped neurogenic genes and shared with them a nearly identical expression pattern suggesting that lncRNAs control corticogenesis by tuning the expression of nearby cell fate determinants. We assessed the power of our approach by manipulating lncRNAs and protein-coding

  18. Changes in the transcriptome of Entamoeba histolytica accompany the epigenetic silencing of the amoebapore gene ArrayExpress

    ID: E-GEOD-28883

    Description: ripts (459.m00030), had the potential to encode a 66 amino acid protein. Antibodies raised against a synthetic N-terminal peptide of the gene did not recognize any such protein in trophozoite lysates. Trophozoite cultures grown with the proteasome inhibitor MG-132 to prevent protein degradation, also did not have any detectable protein. Transfections with a plasmid in which the Ehactin gene promoter elements were used to flank the 459.m gene, significantly increased their level transcript but again, no protein was detected. Transfectants...

  19. The DMD locus harbours multiple long non-coding RNAs which orchestrate and control transcription of muscle dystrophin mRNA isoforms BioProject

    ID: PRJNA137551

    Keywords: Transcriptome or Gene expression

    Access Type: download

  20. Fisher Project : Mitochondrial Genome Sequences Illuminate Maternal Lineages of Conservation Concern in a Rare Carnivore BioProject

    ID: PRJEB2475

    Keywords: Other

    Access Type: download

    dataset.description: genome, with much of the attention focused on the non-coding displacement (D) loop. We used massively parallel multiplexed sequencing to sequence complete mitochondrial genomes from 40 fishers, a threatened carnivore that possesses low mitogenomic diversity. This allowed us to test a key assumption of conservation genetics, specifically, that the D-loop accurately reflects genealogical relationships and variation of the ...

Displaying 20 of 21 results for "MIAT"