LINC00200 | bioCADDIE Data Discovery Index
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Displaying 20 of 37 results for "LINC00200"
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  1. Identification of long ncRNAs using RNA-seq in Arabidopsis BioProject

    ID: PRJNA168212

    Keywords: Transcriptome or Gene expression

    Access Type: download

  2. Data from: Genome-wide analysis uncovers regulation of long intergenic noncoding RNAs in Arabidopsis Dryad

    DateIssued: 02-12-2013

    Description: Long intergenic noncoding RNAs (lincRNAs) transcribed from intergenic regions of yeast and an...

  3. CRISPRi-based genome-scale identification of functional long non-coding RNA loci in human cells BioProject

    ID: PRJNA335860

    Keywords: Other

    Access Type: download

  4. Expression and Prognostic impact of LncRNAs in AML BioProject

    ID: PRJNA268451

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: Long noncoding RNAs (lncRNAs) are transcripts longer than 200 nucleotides located within the i
  5. Data from: Genome-wide discovery and characterization of maize long non-coding RNAs Dryad

    DateIssued: 03-04-2014

    Description: Background: Long noncoding RNAs (lncRNAs) are transcripts that are 200 bp or longer, do not encode proteins, and potentially...

  6. Transcription profiling by high throughput sequencing of Arabidopsis roots, leaves, flowers and siliques ArrayExpress

    ID: E-GEOD-38612

    Description: We profiled Arabidopsis transcriptom using RNA-seq. Each RNA library yielded 223-250 million 101-bp single-end reads (235M on average). Using Tophat and Cu...

  7. Changes of lncRNA expression in primary human skin fibroblasts after irradiation with UVA or UVB BioProject

    ID: PRJNA349487

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: itching on a variety of damage response pathways. Long non-coding RNA (lncRNA) is thought to play critical roles in regulating expression of protein-coding genes...
  8. Expression and Prognostic impact of LncRNAs in Acute Myeloid Leukemia BioProject

    ID: PRJNA268523

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: Long noncoding RNAs (lncRNAs) are transcripts longer than 200 nucleotides located within the i
  9. Detection of non-coding deletion CNVs upstream to FOXF1 [Agilent-022084] BioProject

    ID: PRJNA170042

    Keywords: Variation

    Access Type: download

  10. Expression and Prognostic impact of LncRNAs in AML ArrayExpress

    ID: E-GEOD-63614

    Description: Long noncoding RNAs (lncRNAs) are transcripts longer than 200 nucleotides located within the i

  11. Detection of non-coding deletion CNVs upstream to FOXF1 [Agilent-030795] BioProject

    ID: PRJNA170421

    Keywords: Variation

    Access Type: download

  12. ChIP-chip analysis to determine GLI2 binding sites ArrayExpress

    ID: E-GEOD-39255

    Description: F1. An unanticipated and tremendous amount of the non-coding sequences of the human genome are transcribed. Long non-coding RNAs (lncRNAs) are non-protein coding transcripts longer than 200 nucleotides and...

  13. Detection of non-coding deletion CNVs upstream to FOXF1 [Agilent-030795] ArrayExpress

    ID: E-GEOD-39254

    Description: PV. An unanticipated and tremendous amount of the non-coding sequences of the human genome are transcribed. Long non-coding RNAs (lncRNAs) are

  14. Detection of non-coding deletion CNVs upstream to FOXF1 [Agilent-022084] ArrayExpress

    ID: E-GEOD-38978

    Description: PV. An unanticipated and tremendous amount of the non-coding sequences of the human genome are transcribed. Long non-coding RNAs (lncRNAs) are

  15. FOXF1 promoter-putative enhancer chromatin looping ArrayExpress

    ID: E-GEOD-39256

    Description: ed. An unanticipated and tremendous amount of the non-coding sequences of the human genome are transcribed. Long non-coding RNAs (lncRNAs) are non-protein coding transcripts longer than 200 nucleotides and their functions remain enig...

  16. Genomic copy-number analysis in Alveolar capillary dysplasia (ACD) patient samples BioProject

    ID: PRJNA170424

    Keywords: Variation

    Access Type: download

    dataset.description: Non-coding copy number changes in 16q24.1 upstream of FOXF1 were identified in two patients with ACD. An unantic...
  17. LncRNA_Finder - Pipeline Source Code Dryad

    DateIssued: 03-04-2014

    Description: SCRIPTION: LncRNA_Finder enables the discovery of long noncoding RNAs using native sequence fasta files. This script essentially uses the results from external alignment programs and performs long noncoding RNA filtering via a set of specified parameters. 2, Prerequisite of external softwares Need to install ncbi_blast standalone package, bowtie and cpc in your local environment correctly and set the running path of external programs at the beginning of the pipeline 3, Usage Perl LncRNA_Finder.pl -i -p -k -s -o [-t <# of thread>] [-r ] [-f ] [-m <# of mismatch>] [-e ] Options: -i -p -k -s -o -h help -t number of thread for the computation || default=4 -r minimum lncRNA length || ...

  18. Analyses of Long Non-coding RNA and mRNA Profiles using Microarray Platform in Mice Brain during Japanese Encephalitis Virus Infection BioProject

    ID: PRJNA374352

    Keywords: Transcriptome or Gene expression

    Access Type: download

  19. ChIP-chip analysis to determine GLI2 binding sites BioProject

    ID: PRJNA170422

    Keywords: Epigenomics

    Access Type: download

    dataset.description: F1. An unanticipated and tremendous amount of the non-coding sequences of the human genome are transcribed. Long non-coding RNAs (lncRNAs) are non-protein coding transcripts longer than 200 nucleotides and...
  20. FOXF1 promoter-putative enhancer chromatin looping BioProject

    ID: PRJNA170423

    Keywords: Other

    Access Type: download

    dataset.description: ed. An unanticipated and tremendous amount of the non-coding sequences of the human genome are transcribed. Long non-coding RNAs (lncRNAs) are non-protein coding transcripts longer than 200 nucleotides and their functions remain enig...

Displaying 20 of 37 results for "LINC00200"