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Displaying 20 of 80 results for "HOXD13"
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  1. Focal amplification of HOXD-harboring chromosome region is implicated in multiple-walled carbon nanotubes-induced carcinogenicity BioProject

    ID: PRJNA200919

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: Amplificaition of HOXD9 and HOXD13 genes was found in MWCNTs induced carcinogencity. By overexpression or silence of of HOXD9 and HOXD13 gen...
  2. Distinct Global Shifts in Genomic Binding Profiles of Limb Malformation Associated HOXD13 Mutations BioProject

    ID: PRJNA192680

    Keywords: Other

    Access Type: download

  3. Myelodysplastic syndrome: NUP98-HoxD13 (NHD13) expression effect on hematopoietic stem cells BioProject

    ID: PRJNA276285

    Keywords: Transcriptome or Gene expression

    Access Type: download

  4. Focal amplification of HOXD-harboring chromosome region is implicated in multiple-walled carbon nanotubes-induced carcinogenicity ArrayExpress

    ID: E-GEOD-46542

    Description: Amplificaition of HOXD9 and HOXD13 genes was found in MWCNTs induced carcinogencity. By overexpression or silence of of HOXD9 and HOXD13 gen...

  5. Focal amplification of HOXD-harboring chromosome region is implicated in multiple-walled carbon nanotubes-induced carcinogenicity OmicsDI

    ID: E-GEOD-46542

    Date Released: 06-03-2014

    Description: Amplificaition of HOXD9 and HOXD13 genes was found in MWCNTs induced carcinogencity. By overexpression or silence of of HOXD9 and HOXD13 gen...

  6. Distinct Global Shifts in Genomic Binding Profiles of Limb Malformation Associated HOXD13 Mutations OmicsDI

    ID: E-GEOD-44799

    Date Released: 05-03-2014

    Description: mechanism underlying a novel missense mutation in HOXD13 (Q317K) associated with a complex hand and foot malformation phenotype. The glutamine at position 317 (position 50 of the homeodomain) is conserved in most homeodomains, a notable exception being bicoid-type homeodomains that have K at this position. Our results show that the mutation results in a shift in the binding pro...

  7. Distinct Global Shifts in Genomic Binding Profiles of Limb Malformation Associated HOXD13 Mutations ArrayExpress

    ID: E-GEOD-44799

    Description: mechanism underlying a novel missense mutation in HOXD13 (Q317K) associated with a complex hand and foot malformation phenotype. The glutamine at position 317 (position 50 of the homeodomain) is conserved in most homeodomains, a notable exception being bicoid-type homeodomains that have K at this position. Our results show that the mutation results in a shift in the binding pro...

  8. Myelodysplastic syndrome: NUP98-HoxD13 (NHD13) expression effect on hematopoietic stem cells OmicsDI

    ID: E-GEOD-66264

    Date Released: 03-11-2016

    Description: atopoietic stem cells (HSCs) expressing the Nup98-HoxD13 (NHD13) fusion gene. NHD13 induces myelodysplastic syndrome (MDS) in mice. Results provide insight into the molecular basis of the myelodysplastic phenotype ...

  9. Myelodysplastic syndrome: NUP98-HoxD13 (NHD13) expression effect on hematopoietic stem cells ArrayExpress

    ID: E-GEOD-66264

    Description: atopoietic stem cells (HSCs) expressing the Nup98-HoxD13 (NHD13) fusion gene. NHD13 induces myelodysplastic syndrome (MDS) in mice. Results provide insight into the molecular basis of the myelodysplastic phenotype ...

  10. HOX13 activity reprograms cis-regulatory modules during digit development (RNA-Seq) BioProject

    ID: PRJNA321344

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: tructures, the digits. Inactivation of HOXA13 and HOXD13 transcription factors (HOX13) leads to complete digit agenesis in mice, but how HOX13 regulate transcriptional outcomes and confer identity to the distal-most limb cells has remained elusive. Here we performed genome-wide profiling of HOX13 by chromatin immunoprecipitation and analyzed the transcriptome and chromatin state of wild type early and late-distal limb buds, as well as Hoxa13-/-;Hoxd13-/- compound mutant limb buds. Our resu...
  11. HOX13 activity reprograms cis-regulatory modules during digit development (ChIP-Seq) BioProject

    ID: PRJNA321345

    Keywords: Epigenomics

    Access Type: download

    dataset.description: tructures, the digits. Inactivation of HOXA13 and HOXD13 transcription factors (HOX13) leads to complete digit agenesis in mice, but how HOX13 regulate transcriptional outcomes and confer identity to the distal-most limb cells has remained elusive. Here we performed genome-wide profiling of HOX13 by chromatin immunoprecipitation and analyzed the transcriptome and chromatin state of wild type early and late-distal limb buds, as well as Hoxa13-/-;Hoxd13-/- compound mutant limb buds. Our resu...
  12. SPD_obo_file Dryad

    DateIssued: 01-10-2013

    Description: Ontology OBO file version for spiders (Araneae) used during the matching process.

  13. HXD13_HETFR UniProt:Swiss-Prot

    ID: Q9IA17

    Description: Homeobox protein Hox-D13 Homeobox

    gene.name: HOXD13
  14. HXD13_CARPS UniProt:Swiss-Prot

    ID: Q5EU41

    Description: Homeobox protein Hox-D13 Homeobox Ala-rich

    gene.name: HOXD13
  15. Integration of Shh and Fgf signaling in controlling Hox expression in cultured limb cells [4C-seq] BioProject

    ID: PRJNA358046

    Keywords: Other

    Access Type: download

    dataset.description: at both factors are required to get activation of Hoxd13 in limb mesenchymal cells. However, the analysis of the enhancer landscapes flanking the HoxD cluster reveals that the bimodal regulatory switch observed in vivo is not fully achieved under these in vitro conditions, suggesting the requirement for other factors. Overall design: 4C-seq analysis of Hoxd11 and Hoxd13 3D interactions in wt chick limbs, Ozd mutant limbs or cultured wt limb mesenchymal cells...
  16. Appendix_A_Intersection_HAO_SPD_TADS Dryad

    DateIssued: 01-10-2013

    Description: List of correspondences found in common between HAO, SPD & TADS.

  17. HAO vs SPD (spider) Dryad

    DateIssued: 01-10-2013

    Description: Excel aligment between Hymenoptera (HAO) and Araneae (SPD).

  18. Appendix_D_SPD_HAO_Manual_vs_LOOM Dryad

    DateIssued: 01-10-2013

    Description: Comparison of manually identified correspondences and those found by the algorithm LOOM (from Bioportal) between HAO & SPD.

  19. Burkholderia pseudomallei strain:BDE : Burkholderia pseudomallei strain:BDE Genome sequencing and assembly BioProject

    ID: PRJNA244246

    Keywords: Genome sequencing and assembly

    Access Type: download

  20. A role for HOX13 proteins in the regulatory switch between TADs at the HoxD locus BioProject

    ID: PRJNA315567

    Keywords: Other

    Access Type: download

    dataset.description: on. Overall design: 4C-seq analysis of Hoxd11 and Hoxd13 3D interactions in proximal and distal limbs from E12.5 wt or Hoxa13-/-;Hoxd13-/- mutant embryos...

Displaying 20 of 80 results for "HOXD13"