HOXA13 | bioCADDIE Data Discovery Index
Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Displaying 20 of 23 results for "HOXA13"
i
  1. Mouse ES Cells: Control vs Hottip_VP160 and Hoxa13 BioProject

    ID: PRJNA375921

    Keywords: Transcriptome or Gene expression

    Access Type: download

  2. HOXA13 Chromatin Immunoprecipitation on human HG18 Nimblegen 2 array promoter set BioProject

    ID: PRJNA103921

    Keywords: Epigenomics

    Access Type: download

  3. Solution NMR-derived complex structure of Hoxa13 DNA binding domain bound to DNA PDB

    ID: PDB:2LD5

    Description: Homeobox protein Hox-A13/DNA

  4. RNAi knock-down of HOXA13 in human foreskin fibroblasts ArrayExpress

    ID: E-SMDB-4279

    Description: HOXA13 was depleted by siRNA mediated technology in Foreskin Fibroblast at 20nM and 100nM siRNA concentration. As a control siGFP w...

  5. HOXA13 Chromatin Immunoprecipitation on human HG18 Nimblegen 2 array promoter set ArrayExpress

    ID: E-GEOD-9922

    Description: HOXA13 Binding sites were located genome wide in primary human foreskin fibroblasts Tiled promoters with a probe per 100bp of refse...

  6. NMR Structure of A13 homedomain PDB

    ID: PDB:2L7Z

    Description: Homeobox protein Hox-A13

    gene.name: HOXA13, HOX1J
  7. HOXA13 Chromatin Immunoprecipitation on human HG18 Nimblegen 2 array promoter set OmicsDI

    ID: E-GEOD-9922

    Date Released: 05-02-2014

    Description: HOXA13 Binding sites were located genome wide in primary human foreskin fibroblasts Tiled promoters with a probe per 100bp of refse...

  8. HoxA13 gain-of-function in chicken embryo PSM progenitors ArrayExpress

    ID: E-GEOD-38107

    Description: in Stage 9 somites chicken embryo overexpressing HoxA13 or a control H2B-Venus. The experiment was designed to have biological duplicate in each conditions. The gain-of-function was obtained by electroporating the embryo at Stage 5HH with a vector containing HoxA13 under the CAGGS promoter with an H2B venus reporter. In order to have enough material for the microarray, 7 embryos were pooled in each sample before the hybridization....

  9. RNAi knock-down of HOXA13 in human foreskin fibroblasts OmicsDI

    ID: E-SMDB-4279

    Date Released: 10-12-2011

    Description: HOXA13 was depleted by siRNA mediated technology in Foreskin Fibroblast at 20nM and 100nM siRNA concentration. As a control siGFP w...

  10. HoxA13 gain-of-function in chicken embryo PSM progenitors. BioProject

    ID: PRJNA167365

    Keywords: Transcriptome or Gene expression

    Access Type: download

  11. HoxA13 gain-of-function in chicken embryo PSM progenitors. OmicsDI

    ID: E-GEOD-38107

    Date Released: 05-31-2012

    Description: in Stage 9 somites chicken embryo overexpressing HoxA13 or a control H2B-Venus. The experiment was designed to have biological duplicate in each conditions. The gain-of-function was obtained by electroporating the embryo at Stage 5HH with a vector containing HoxA13 under the CAGGS promoter with an H2B venus reporter. In order to have enough material for the microarray, 7 embryos were pooled in each sample before the hybridization....

  12. HOX13 activity reprograms cis-regulatory modules during digit development (RNA-Seq) BioProject

    ID: PRJNA321344

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: most limb structures, the digits. Inactivation of HOXA13 and HOXD13 transcription factors (HOX13) leads to complete digit agenesis in mice, but how HOX13 regulate transcriptional outcomes and confer identity to the distal-most limb cells has remained elusive. Here we performed genome-wide profiling of HOX13 by chromatin immunoprecipitation and analyzed the transcriptome and chromatin state of wild type early and late-distal limb buds, as well as Hoxa13-/-;Hoxd13-/- compound muta...
  13. Transcription profiling by array of limb buds from Gli3 mutant mouse embryos OmicsDI

    ID: E-MEXP-3495

    Date Released: 10-16-2015

    Description: lates of mouse limb buds of Gli3 constitutive and Hoxa13-Cre Gli3 conditional mutant embryos was compared to the transcriptome of limb buds of wild type and Gli3 heterozygote embryos at embryonic day E11.75. All samples ...

  14. Transcription profiling by array of limb buds from Gli3 mutant mouse embryos ArrayExpress

    ID: E-MEXP-3495

    Description: lates of mouse limb buds of Gli3 constitutive and Hoxa13-Cre Gli3 conditional mutant embryos was compared to the transcriptome of limb buds of wild type and Gli3 heterozygote embryos at embryonic day E11.75. All samples ...

  15. Gene Expression Analyisis of T-ALL LOUCY cell lines treated with ETV6 siRNA vs. scramble control siRNA ArrayExpress

    ID: E-GEOD-33820

    Description: egulated in ETV6 mutant immature T-ALLs including HOXA13, PRDM16, PTEN and CD33. 4 samples were analyzed: two biological replicates for each experimental group....

  16. HOX13 activity reprograms cis-regulatory modules during digit development (ChIP-Seq) BioProject

    ID: PRJNA321345

    Keywords: Epigenomics

    Access Type: download

    dataset.description: most limb structures, the digits. Inactivation of HOXA13 and HOXD13 transcription factors (HOX13) leads to complete digit agenesis in mice, but how HOX13 regulate transcriptional outcomes and confer identity to the distal-most limb cells has remained elusive. Here we performed genome-wide profiling of HOX13 by chromatin immunoprecipitation and analyzed the transcriptome and chromatin state of wild type early and late-distal limb buds, as well as Hoxa13-/-;Hoxd13-/- compound muta...
  17. Gene Expression Analyisis of T-ALL LOUCY cell lines treated with ETV6 siRNA vs. scramble control siRNA BioProject

    ID: PRJNA148045

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: egulated in ETV6 mutant immature T-ALLs including HOXA13, PRDM16, PTEN and CD33. Overall design: 4 samples were analyzed: two biological replicates for each experimental group....
  18. Medium coverage whole genome sequencing to elucidate a chromosome 7 pericentric inversion. : - BioProject

    ID: PRJEB13759

    Keywords: Other

    Access Type: download

    dataset.description: he 7p15 breakpoint was located 523 kb upstream of HOXA13, the locus for hand-foot-genital syndrome. By inference from studies of HOXA locus control in the mouse, we suggest that the inversion has delocalised a HOXA13 enhancer to produce the phenotype observed in our patient. This study demonstrates how modern genetic diagnostic approach can characterise structural variants at nucleotide resolution and provide potential insights into functional regulation....
  19. HXA13_AMBME UniProt:Swiss-Prot

    ID: P50210

    Description: Homeobox protein Hox-A13 Homeobox

    gene.name: HOXA13
  20. HXA13_CHICK UniProt:Swiss-Prot

    ID: Q90X25

    Description: Homeobox protein Hox-A13 Homeobox Poly-Ala

    gene.name: HOXA13

Displaying 20 of 23 results for "HOXA13"