HNRNPC | bioCADDIE Data Discovery Index
Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Displaying 20 of 29 results for "HNRNPC"
i
  1. Solution structure of hnRNP C RRM in complex with 5'-AUUUUUC-3' RNA PDB

    ID: PDB:2MXY

    Description: Heterogeneous nuclear ribonucleoproteins C1/C2

  2. Solution structure of hnRNP C RRM in complex with 5'-UUUUC-3' RNA PDB

    ID: PDB:2MZ1

    Description: Heterogeneous nuclear ribonucleoproteins C1/C2

  3. Transcriptome profiling of cells depleted of hnRNPC, Upf1, or co-depleted of hnRNPC and Upf1. BioProject

    ID: PRJEB11541

    Keywords: Transcriptome or Gene expression

    Access Type: download

  4. Transcription profiling of cytoplasmic and nuclear RNA of hnRNPC depleted cells and ER-Raf1 activated HR1 cells BioProject

    ID: PRJEB11558

    Keywords: Other

    Access Type: download

  5. Transcriptome profiling of cells depleted of hnRNPC, Upf1, or co-depleted of hnRNPC and Upf1 ArrayExpress

    ID: E-MTAB-4008

    Description: The purpose of this experiment was to compare differences in Alu-exon inclusion in cells depleted of hnRNPC, Upf1, or both.

  6. Transcriptome profiling of cells depleted of hnRNPC, Upf1, or co-depleted of hnRNPC and Upf1. OmicsDI

    ID: E-MTAB-4008

    Date Released: 10-28-2015

    Description: The purpose of this experiment was to compare differences in Alu-exon inclusion in cells depleted of hnRNPC, Upf1, or both.

  7. hNRNPC iCLIP BioProject

    ID: PRJEB2253

    Keywords: Other

    Access Type: download

  8. Transcription profiling by high throughput sequencing of HNRNPC knockdown and control HeLa cells BioProject

    ID: PRJEB3048

    Keywords: Transcriptome or Gene expression

    Access Type: download

  9. DHX9 suppresses spurious RNA processing defects originating from the Alu invasion of the human genome [hnRNPC FLASH CLIP-seq] BioProject

    ID: PRJNA374033

    Keywords: Other

    Access Type: download

  10. Transcription profiling of cytoplasmic and nuclear RNA of hnRNPC depleted cells and ER-Raf1 activated HR1 cells ArrayExpress

    ID: E-MTAB-4009

    Description: differences in gene expression in cytoplasmic and nuclear RNA of cells depleted of hnRNPC....

  11. Transcription profiling by high throughput sequencing of HNRNPC knockdown and control HeLa cells ArrayExpress

    ID: E-MTAB-1147

    Description: eq experiments on two replicate samples from each HNRNPC knockdown (KD1 and KD2) As well as from control HeLa cells. Library preparation was preformed according to mRNA Sequencing Sample Preparation ...

  12. Transcription profiling of cytoplasmic and nuclear RNA of hnRNPC depleted cells and ER-Raf1 activated HR1 cells OmicsDI

    ID: E-MTAB-4009

    Date Released: 10-29-2015

    Description: differences in gene expression in cytoplasmic and nuclear RNA of cells depleted of hnRNPC....

  13. Transcription profiling by high throughput sequencing of HNRNPC knockdown and control HeLa cells OmicsDI

    ID: E-MTAB-1147

    Date Released: 08-22-2016

    Description: eq experiments on two replicate samples from each HNRNPC knockdown (KD1 and KD2) As well as from control HeLa cells. Library preparation was preformed according to mRNA Sequencing Sample Preparation ...

  14. Data from: Splicing repression allows the gradual emergence of new Alu-exons in primate evolution Dryad

    DateIssued: 11-21-2016

    Description: we assess the interplay of splicing repression by hnRNPC and nonsense-mediated mRNA decay (NMD) in the quality control and evolution of new Alu-exons. We identify 3100 new Alu-exons and show that NMD more efficiently recognises transcripts with Alu-exons compared to other exons...

  15. CLIP-Seq of H. sapiens HeLa cells to investigate transcriptome-wide mapping of hnRNP C and U2AF65 ArrayExpress

    ID: E-MTAB-1371

    Description: ment to assess the binding of the highly abundant nuclear RNA-binding protein hnRNP C and core splicing factor U2AF65 on a genomic scale. To investigate how both proteins com...

  16. Transcriptome-wide mapping of hnRNP C and U2AF65 using iCLIP BioProject

    ID: PRJEB636

    Keywords: Other

    Access Type: download

  17. Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions ArrayExpress

    ID: E-GEOD-56010

    Description: RNA structure to facilitate the access of RBM for heterogeneous nuclear ribonucleoprotein C (hnRNP C). We term this mechanism m6A-switch. Through combining PAR-CLIP with Me-RIP, we identify 39,060 m6A-switches among hnRNP C bindi...

  18. CLIP-Seq of H. sapiens HeLa cells to investigate transcriptome-wide mapping of hnRNP C and U2AF65 OmicsDI

    ID: E-MTAB-1371

    Date Released: 05-03-2014

    Description: ment to assess the binding of the highly abundant nuclear RNA-binding protein hnRNP C and core splicing factor U2AF65 on a genomic scale. To investigate how both proteins com...

  19. Widespread N6-methyladenosine-dependent RNA Structural Switches Regulate RNA-Protein Interactions BioProject

    ID: PRJNA242201

    Keywords: Other

    Access Type: download

    dataset.description: RNA structure to facilitate the access of RBM for heterogeneous nuclear ribonucleoprotein C (hnRNP C). We term this mechanism m6A-switch. Through combining PAR-CLIP with Me-RIP, we identify 39,060 m6A-switches among hnRNP C bindi...
  20. RNAi profiling by array of human HeLa cells with hnRNP C siRNA knockdown using a splice-junction microarray to detect changes in alternative splicing ArrayExpress

    ID: E-MTAB-367

    Description: poly(A)+ RNA samples from hnRNP C siRNA knockdown and control HeLa cells were compared on a splice-junction microarray to detect changes in alternative splicing. U...


Displaying 20 of 29 results for "HNRNPC"