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Displaying 20 of 27 results for "GATAD2B"
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  1. Unsupervised hierarchical clustering of iNPCs induced by 6 or 5 TFs ArrayExpress

    ID: E-GEOD-29724

    Description: using iNPCs induced by 6 TFs (Pax6, Hmga2, Etv6, Gatad2b, Nfxl1, and Esx1) and 5 TFs (Esx1 was omitted from 6 TFs). Unsupervised hierarchical clustering indicated that iNPC is expressing a global transcriptional profile more similar to that of NPCs rather than ...

  2. ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [ChIP-seq] BioProject

    ID: PRJNA317161

    Keywords: Epigenomics

    Access Type: download

    dataset.description: he NuRD subunit GATAD2A. Furthermore, GATAD2A and GATAD2B exclusively form homodimers and they thus define mutually exclusive NuRD subcomplexes. ZMYND8 and MBD3 share a large number of genome-wide binding sites, mostly active promoters and enhancers. Depletion of ZMYND8 does not affect NuRD occupancy genome-wide and expression of NuRD/ZMYND8 target genes in steady-state asynchronous cells. However, ZMYND8 facilitates immediate recruitment of GATAD2A/NuRD to induced sites of DNA damage. These results thus show that a speci...
  3. Unsupervised hierarchical clustering of iNPCs induced by 6 or 5 TFs BioProject

    ID: PRJNA153865

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: using iNPCs induced by 6 TFs (Pax6, Hmga2, Etv6, Gatad2b, Nfxl1, and Esx1) and 5 TFs (Esx1 was omitted from 6 TFs). Unsupervised hierarchical clustering indicated that iNPC is expressing a global transcriptional profile more similar to that of NPCs rather than ...
  4. Homo sapiens : Identification of p68 interacting RNAs BioProject

    ID: PRJNA305666

    Keywords: transcriptome

    Access Type: download

  5. Genome-wide map of long non-coding RNA steroid receptor RNA activator (SRA) and its associated RNA heliase p68 in human pluripotent stem cells NTERA2 ArrayExpress

    ID: E-GEOD-58641

    Description: We performed Chromatin Isolation by RNA Purification (ChIRP) of SRA and ChIP of p68 following by high-throughput sequencing in NTERA2 cell line. We fi...

  6. Crystal Structure of HIV-1 Reverse Transcriptase (RT) in Complex with a triazole derived NNRTI PDB

    ID: PDB:2RKI

    Description: HIV-1 reverse transcriptase (RT) p66 (E.C.2.7.7.49), HIV-1 reverse transcriptase (RT) p51 (E.C.2.7.7.49)

  7. ZMYND8 co-localizes with NuRD on target genes and regulates recruitment of GATAD2A/NuRD to sites of DNA damage [RNA-seq] BioProject

    ID: PRJNA317160

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: he NuRD subunit GATAD2A. Furthermore, GATAD2A and GATAD2B exclusively form homodimers and they thus define mutually exclusive NuRD subcomplexes. ZMYND8 and MBD3 share a large number of genome-wide binding sites, mostly active promoters and enhancers. Depletion of ZMYND8 does not affect NuRD occupancy genome-wide and expression of NuRD/ZMYND8 target genes in steady-state asynchronous cells. However, ZMYND8 facilitates immediate recruitment of GATAD2A/NuRD to induced sites of DNA damage. These results thus show that a speci...
  8. HCV NS5B allosteric inhibitor complex PDB

    ID: PDB:2HWH

    Description: RNA-directed RNA polymerase (EC 2.7.7.48) (NS5B) (p68)]

  9. HCV NS5B allosteric inhibitor complex PDB

    ID: PDB:2HWI

    Description: RNA-directed RNA polymerase (NS5B) (p68) (E.C.2.7.7.48)

  10. Crystal structure of hPCNA bound to residues 452-466 of the DNA polymerase-delta-p66 subunit PDB

    ID: PDB:1U76

    Description: Proliferating cell nuclear antigen, KANRQVSITGFFQRK peptide from DNA polymerase delta subunit 3

  11. HIV reverse transcriptase in complex with inhibitor 7e (NNRTI) PDB

    ID: PDB:2RF2

    Description: Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4) (p66 RT) (E.C.2.7.7.49)

  12. Transcription profiling of p68/72 deficient C2C12 cells to investigate the function of p68/p72 in muscle gene expression and skeletal C2C12 cell diffe... ArrayExpress

    ID: E-GEOD-5305

    Description: This project investigates the function of p68/p72 in muscle gene expression and skeletal C2C12 cell differentiation. p68/p72 in C2C12 cells cultured i...

  13. p68 SMC differentiation BioProject

    ID: PRJNA96309

    Keywords: Transcriptome or Gene expression

    Access Type: download

  14. Genome-wide map of long non-coding RNA steroid receptor RNA activator (SRA) and its associated RNA heliase p68 in human pluripotent stem cells NTERA2 BioProject

    ID: PRJNA253062

    Keywords: Epigenomics

    Access Type: download

  15. Unsupervised hierarchical clustering of iNPCs induced by 6 or 5 TFs OmicsDI

    ID: E-GEOD-29724

    Date Released: 06-13-2011

    Description: using iNPCs induced by 6 TFs (Pax6, Hmga2, Etv6, Gatad2b, Nfxl1, and Esx1) and 5 TFs (Esx1 was omitted from 6 TFs). Unsupervised hierarchical clustering indicated that iNPC is expressing a global transcriptional profile more similar to that of NPCs rather than ...

  16. ¬¬ZMYND8 co-localizes with NuRD on target genes and regulates poly-ADP-ribose dependent recruitment of GATAD2A/NuRD to sites of DNA damage OmicsDI

    ID: PXD003856

    Date Released: 01-01-1000

    Description: he NuRD subunit GATAD2A. Furthermore, GATAD2A and GATAD2B exclusively form homodimers and they thus define mutually exclusive NuRD subcomplexes. ZMYND8 and MBD3 share a large number of genome-wide binding sites, mostly active promoters and enhancers. Depletion of ZMYND8 does not affect NuRD occupancy genome-wide and expression of NuRD/ZMYND8 target genes in steady-state asynchronous cells. However, ZMYND8 facilitates immediate recruitment of GATAD2A/NuRD to induced sites of DNA damage in a PAR-dependent manner. These resul...

  17. Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA ArrayExpress

    ID: E-GEOD-24126

    Description: CCCTC-binding factor (CTCF) is a DNA-binding protein that plays important roles in chromatin organization, though the mechanism by which CTCF carries ...

  18. Expression signatures of human HeLa cells with RNAi targetting A1 hnRNP, FUS, H hnRNP and p68-DDX5 ArrayExpress

    ID: E-GEOD-12058

    Description: Transcription profiling of human HeLa cells (cervical cancer cell line) transfected with a plasmid expressing shRNAs cloned into the pSuper expression...

  19. p68 SMC differentiation GEMMA

    ID: 1680

    Keywords: functional genomics

    Description: This project investigates the function of p68/p72 in muscle gene expression and skeletal C2C12 cell differentiation. p68/p72 in C2C12 cells cultured i...

  20. Analysis of the human endothelial cell response to Borrelia burgdorferi wild-type and deleted in the gene encoding the integrin ligand P66 [experiment... ArrayExpress

    ID: E-GEOD-27252

    Description: The overall goal of these experiments was to determine how human cells respond to ontegrin binding by Borrelia burgdorferi. Lyme disease is the most c...


Displaying 20 of 27 results for "GATAD2B"