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Displaying 20 of 31 results for "CBX1"
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  1. Crystal structure of human chromobox homolog 1 (CBX1) PDB

    ID: PDB:3F2U

    Description: Chromobox protein homolog 1

  2. chromo shadow domain of CBX1 in complex with a histone peptide PDB

    ID: PDB:5T1G

    Description: Chromobox protein homolog 1, H31

  3. ASXL1_MOUSE UniProt:Swiss-Prot

    ID: P59598

    Description: hoserine Phosphoserine Abolishes interaction with CBX1, CBX3 and CBX5; when associated with A-172 and A-174 Abolishes interaction with CBX1, CBX3 and CBX5; when associated with A-170 and A-174 Abolishes interaction with CBX1, CBX3 and CBX5; when associated with A-170 and A-172...

  4. Human Heterochromatin Proteins form Large Domains Containing KRAB-ZNF Genes BioProject

    ID: PRJNA96117

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: mouse cells. Unexpectedly, we found that HP1beta (CBX1) and SUV39H1 bind to genes encoding KRAB domain containing zinc finger (KRAB-ZNF) transcriptional repressors. These genes constitute one of the largest gene families and are organized in clusters in the human genome. Preference of CBX1 for this gene family was observed in both human and mouse cells. High-resolution mapping on human Chromosome 19 revealed that CBX1 coats large domains 0.1 - 4Mb in si...
  5. HP1beta paper raw/original microscopy images Dryad

    DateIssued: 10-02-2015

    Description: All raw images used in this study at 60X oil NA1.4 lens, were taken using a spinning disk confocal microscope (CSUX, Yokogawa, Japan) equipped with an...

    dataset.keywords: CBX1
  6. HP1β has distinct subnuclear localizations, chromatin binding features and functions in embryonic stem cells and differentiating cells [expression] ArrayExpress

    ID: E-GEOD-65121

    Description: arrays to identify the gene expression changes in Cbx1-/- (HP1beta) knockout embryonic stem cells (ESCs) and Cbx5-/- (HP1alpha) knockout ESCs compared to WT ESCs and in embryoid bodies (EBs) dif...

  7. HP1β has distinct subnuclear localizations, chromatin binding features and functions in embryonic stem cells and differentiating cells [expression] BioProject

    ID: PRJNA273153

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: arrays to identify the gene expression changes in Cbx1-/- (HP1beta) knockout embryonic stem cells (ESCs) and Cbx5-/- (HP1alpha) knockout ESCs compared to WT ESCs and in embryoid bodies (EBs) dif...
  8. PCGF6-PRC1 suppresses premature differentiation of embryonic stem cells by silencing germ cell-related genes [RNA-Seq] BioProject

    ID: PRJNA329408

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: Mga. Expression data of ES cells with or without Cbx1/3. Overall design: Mouse embryonic stem cells deficient for Pcgf6 and associating genes were evaluated using RNA-seq. Mouse embryonic stem cells deficient for Cbx1/3 and assoc...
  9. MOUSE HP1 (M31) C TERMINAL (SHADOW CHROMO) DOMAIN PDB

    ID: PDB:1DZ1

    Description: MODIFIER 1 PROTEIN

  10. Vibrio vulnificus : GenomeTrakr Project: CFSAN, MOD1, ORA, or contractor labs BioProject

    ID: PRJNA374342

    Keywords: genome sequencing and assembly

    Access Type: download

  11. DamID in HeLa-C cells BioProject

    ID: PRJNA326732

    Keywords: Epigenomics

    Access Type: download

    dataset.description: with sPom121, Nup98 and control proteins (GFP and Cbx1) Overall design: N-term tag sPom121, Nup98 or GFP and express in HeLa-C cells - conduct deep sequencing...
  12. DamID in HeLa-C cells OmicsDI

    ID: E-GEOD-83692

    Date Released: 07-03-2016

    Description: with sPom121, Nup98 and control proteins (GFP and Cbx1) N-term tag sPom121, Nup98 or GFP and express in HeLa-C cells - conduct deep sequencing...

  13. DamID in HeLa-C cells ArrayExpress

    ID: E-GEOD-83692

    Description: with sPom121, Nup98 and control proteins (GFP and Cbx1) N-term tag sPom121, Nup98 or GFP and express in HeLa-C cells - conduct deep sequencing...

  14. CAF1A_BOVIN UniProt:Swiss-Prot

    ID: A6QLA6

    Description: Chromatin assembly factor 1 subunit A Binds to CBX1 chromo shadow domain Binds to PCNA Necessary for homodimerization and competence for chromatin assembly Binds to p60 PxVxL mot...

  15. Transcription profiling of human mature oocytes and embryonic stem cells reveals overexpression of the proteasome pathway ArrayExpress

    ID: E-GEOD-11450

    Description: odelling network (TOP2A, DNMT3B, JARID2, SMARCA5, CBX1, CBX5) and 18 different zinc finger transcription factors, including ZNF84. Strikingly, a large set of genes was found to code for proteins involved in the ubiquitination and proteasome pathway. Upon hESC differentiation into embryoid bodies, the transcription of this pathway declines. In vitro, we observed a selective sensitivity of hESC to the inhibition of the activity of the proteasome, resulting in loss of pluripotency and cell growth at doses without any detectable effects on differentiated cells. Taken together, these results suggest that the proteasome pathway may play a role in initiating and maintaining pluripotency during early development and in hESC. Experiment Overall Design: We included in this study 9 samples obtained in our laboratory. These samples were hybridized on U133 Plus 2.0 GeneChips (Affymetrix). All samples were normalized using the MAS5 (GCOS 1.2) algorithm, using the default analysis settings and global scaling as normalization method, with a trimmed mean target intensity value (TGT) of each array arbitrarily set to ...

  16. HP1β has distinct subnuclear localizations, chromatin binding features and functions in embryonic stem cells and differentiating cells [expression] OmicsDI

    ID: E-GEOD-65121

    Date Released: 08-19-2015

    Description: arrays to identify the gene expression changes in Cbx1-/- (HP1beta) knockout embryonic stem cells (ESCs) and Cbx5-/- (HP1alpha) knockout ESCs compared to WT ESCs and in embryoid bodies (EBs) dif...

  17. HP1 chromo shadow domain in complex with PXVXL motif of CAF-1 PDB

    ID: PDB:1S4Z

    Description: Chromobox protein homolog 1, Chromatin assembly factor 1 subunit A

    gene.name: CBX1, CBX
  18. Crystal Structure of EMSY-HP1 complex PDB

    ID: PDB:2FMM

    Description: Protein EMSY, Chromobox protein homolog 1

    gene.name: CBX1, CBX
  19. STRUCTURE OF THE CHROMODOMAIN FROM MOUSE HP1BETA IN COMPLEX WITH THE LYSINE 9-METHYL HISTONE H3 N-TERMINAL PEPTIDE, NMR, 25 STRUCTURES PDB

    ID: PDB:1GUW

    Description: CHROMOBOX PROTEIN HOMOLOG 1, HISTONE H3.1

  20. The crystal structure of the heterochromatin protein 1 beta chromoshadow domain complexed with a peptide from Shugoshin 1 PDB

    ID: PDB:3Q6S

    Description: Chromobox protein homolog 1, Shugoshin-like 1

    gene.name: CBX1, CBX

Displaying 20 of 31 results for "CBX1"