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Displaying 20 of 207 results for "CALM1"
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  1. CK5P2_RAT UniProt:Swiss-Prot

    ID: Q9JLH5

    Description: or centrosomal attachment, Golgi localization and CALM1 interaction Interaction with CDK5R1 Required for centrosomal attachment, Golgi localization and CALM1 interaction Phosphoserine...

  2. Crystal structure of myosin X motor domain with 2IQ motifs in pre-powerstroke state PDB

    ID: PDB:5I0I

    Description: Unconventional myosin-X, Calmodulin

    gene.name: CALM1, CALM, CAM, CAM1, CALM2, CAM2, CAMB, CALM3, CALML2, CAM3, CAMC, CAMIII
  3. Differential expression of MEN2 versus VHL human Pheochromocytomas BioProject

    ID: PRJNA112827

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: to have elevated expression in MEN2 tumors (e.g., CALM1, CHGB, CABP1and NPY) and several genes known to be specific to VHL (e.g., AQP1) were independently identified by this approach. In addition to known genes, our method has identified several hundred of previously uncharacterized genes that are enriched in the MEN2 or VHL tumors. Overall design: A 34k expression arrays were generated by printing Oligo nucleotides from the Qiagen HV3 set onto epoxy coated slides (Corning, Inc). Total RNA from pheochrmocytoma tumors or normal adrenals was amplified us...
  4. Differential expression of MEN2 versus VHL human Pheochromocytomas ArrayExpress

    ID: E-GEOD-12642

    Description: to have elevated expression in MEN2 tumors (e.g., CALM1, CHGB, CABP1and NPY) and several genes known to be specific to VHL (e.g., AQP1) were independently identified by this approach. In addition to known genes, our method has identified several hundred of previously uncharacterized genes that are enriched in the MEN2 or VHL tumors. A 34k expression arrays were generated by printing Oligo nucleotides from the Qiagen HV3 set onto epoxy coated slides (Corning, Inc). Total RNA from pheochrmocytoma tumors or normal adrenals was amplified using an Ambion ki...

  5. Solution structure of Ca2+/calmodulin complexed with a peptide representing the calmodulin-binding domain of calmodulin kinase I PDB

    ID: PDB:2L7L

    Description: Calmodulin 1 (Phosphorylase kinase, delta), isoform CRA_a, Calcium/calmodulin-dependent protein kinase type 1 (E.C.2.7.11.17)

    gene.name: CALM1, CALM3, hCG_20313, hCG_21749
  6. Molecular prediction of gastrulation stages with small extra-embryonic gene-set BioProject

    ID: PRJNA112551

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: ed for tumour classification. A set of six genes (CALM1, CPA3, CITED1, DLD, HNRNPDL, and TGFB3), half of which had not been previously associated with any extra-embryonic feature, appeared significantly discriminative and mainly dependent on embryonic tissues for its faithful expression. The predictive value of this set of genes for gastrulation and early neurulation stages, as assessed on naive samples, was remarkably high (93%). In silico connected to the bovine orthologues of the mouse patterning genes, this gene set is proposed as a new trait for embryo staging. As such, this will allow saving the bovine embryo proper for molecular or cellular studies. To us, it offers as well new perspectives for developmental phenotyping and modelling of embryonic/extra-embryonic co-differentiation. Overall design: 20 samples - Amplified material from each embryo (stage 2, stage3, stage4, stage5+) was indirectly labelled using "random" hexamers. O...
  7. Analysis of PGC-1alpha overexpression effects on the whole transcriptome in cultured skeletal muscle cells ArrayExpress

    ID: E-GEOD-28206

    Description: ased in oleate-incubated cells. Downregulation of CALM1, the calcium-modulated δ subunit of phosphorylase kinase, was linked to inactivation of glycogen phosphorylase and greater accumulation of glycogen. The most upregulated gene was PVALB, which is also related to calcium signaling. In conclusion, only the deficient mitochondrial transcriptional program of cultured myotubes is rescued by PGC-1α. New PGC-1α gene targets and pathways arise, some of which may mediate its activating effects in processes such as lipid and carbohydrate storage and angiogenesis. 6 samples from 3 different skeletal muscle cell cultures were used: 3 were transfected with adenovirus containing PGC-1aplha and 3 with adenovirus containing GFP (control). The 3 PGC-1alpha samples were compared against the control samples....

  8. CALM_MAIZE UniProt:Swiss-Prot

    ID: P41040

    Description: Removed Calmodulin EF-hand 1 EF-hand 2 EF-hand 3 EF-hand 4 1 2 3 4 N-acetylalanine N6,N6,N6-trimethyllysine

    gene.name: CALM1
  9. Genome-wide map of BACH1 binding in HEK 293T cells ArrayExpress

    ID: E-GEOD-28051

    Description: fecting cell cycle and apoptosis pathways (ITPR2, CALM1, SQSTM1, TFE3, EWSR1, CDK6, BCL2L11, MAFG) as well as subcellular transport processes (CLSTN1, PSAP, MAPT, vault RNA). The newly identified impact of BACH1 on genes involved in neurodegenerative processes and proliferation provides an interesting basis for future dissection of BACH1-mediated gene repression in neurodegeneration and virus-induced cancerogenesis. Examination of BACH1 binding in HEK 293T cells by chromatin immunoprecipitation-sequencing (CHIP-seq) with input DNA as control....

  10. CALM_SOLLC UniProt:Swiss-Prot

    ID: P27161

    Description: Removed Calmodulin EF-hand 1 EF-hand 2 EF-hand 3 EF-hand 4 1 2 3 4 N-acetylalanine N6,N6,N6-trimethyllysine

    gene.name: CALM1
  11. Transcription profiling of human NSCLC tumor progression ArrayExpress

    ID: E-GEOD-7880

    Description: ted to the wingless (FZD6, RYK, MYC) and calcium (CALM1, ATB2B1, S100A2) signalling pathways which might play a role in metastasis of tumor cells. Other differentially expressed genes were related to cell cycle (CCND1, CDK2), transcription factors (TTF1, TAF2, YY1), nuclear mRNA splicing and mRNA processing (SFRS1, HNRPL), protein-nucleus import (NUTF2, KPNB1, NUP50) and chromatin modification (HIST1H4C, SMARCC1). In SCC, we found an increased expression of CTNNB1, an important mediator in wingless signalling pathway. Among the down-regulated genes in SCC, the utmost fraction belonged to genes coding for ubiquitin mediated proteolysis (UCHL1, PSMA3, COPS6) and ribosomal proteins (RPS26, RPL7A, RPS15). Other down regulated genes were related to transcription factors (TCEA2, TAF10), nuclear mRNA splicing and mRNA processing (SNRPD2, HNRPM). In conclusion, a distinct pattern of gene expression is found during the progression from primary carcinoma to recurrent NSCLC. Our microarray-based expression profiling revealed interesting novel candidate genes and pathways that may contribute to lung cancer progression. Experiment Overall Design: - 20 patients with primary, untreated non-small cell lung cancer (10adenocarcinomas (AC) and 10 squamous cell carcinomas (SCC)) in comparison to lung tissue of 23 patients with stage IIIB or stage IV non-small cell lung cancer (15 AC and 8 SCC) Experiment Overall Design: - Human HG Focus Array, Affymetrix) were used Experiment Overall Design: - Array data wer...

  12. Genome-wide map of BACH1 binding in HEK 293T cells OmicsDI

    ID: E-GEOD-28051

    Date Released: 06-02-2014

    Description: fecting cell cycle and apoptosis pathways (ITPR2, CALM1, SQSTM1, TFE3, EWSR1, CDK6, BCL2L11, MAFG) as well as subcellular transport processes (CLSTN1, PSAP, MAPT, vault RNA). The newly identified impact of BACH1 on genes involved in neurodegenerative processes and proliferation provides an interesting basis for future dissection of BACH1-mediated gene repression in neurodegeneration and virus-induced cancerogenesis. Examination of BACH1 binding in HEK 293T cells by chromatin immunoprecipitation-sequencing (CHIP-seq) with input DNA as control....

  13. Differential expression of MEN2 versus VHL human Pheochromocytomas OmicsDI

    ID: E-GEOD-12642

    Date Released: 05-01-2014

    Description: to have elevated expression in MEN2 tumors (e.g., CALM1, CHGB, CABP1and NPY) and several genes known to be specific to VHL (e.g., AQP1) were independently identified by this approach. In addition to known genes, our method has identified several hundred of previously uncharacterized genes that are enriched in the MEN2 or VHL tumors. A 34k expression arrays were generated by printing Oligo nucleotides from the Qiagen HV3 set onto epoxy coated slides (Corning, Inc). Total RNA from pheochrmocytoma tumors or normal adrenals was amplified using an Ambion ki...

  14. Analysis of PGC-1alpha overexpression effects on the whole transcriptome in cultured skeletal muscle cells BioProject

    ID: PRJNA139647

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: ased in oleate-incubated cells. Downregulation of CALM1, the calcium-modulated δ subunit of phosphorylase kinase, was linked to inactivation of glycogen phosphorylase and greater accumulation of glycogen. The most upregulated gene was PVALB, which is also related to calcium signaling. In conclusion, only the deficient mitochondrial transcriptional program of cultured myotubes is rescued by PGC-1α. New PGC-1α gene targets and pathways arise, some of which may mediate its activating effects in processes such as lipid and carbohydrate storage and angiogenesis. Overall design: 6 samples from 3 different skeletal muscle cell cultures were used: 3 were transfected with adenovirus containing PGC-1aplha and 3 with adenovirus containing GFP (control). The 3 PGC-1alpha samples were compared against the control samples....
  15. CK5P2_PANTR UniProt:Swiss-Prot

    ID: Q19UN5

    Description: or centrosomal attachment, Golgi localization and CALM1 interaction Phosphoserine Phosphothreonine Phosphoserine Phosphoserine Phosphoserine...

  16. CK5P2_MACFA UniProt:Swiss-Prot

    ID: Q9BE52

    Description: or centrosomal attachment, Golgi localization and CALM1 interaction Phosphoserine Phosphoserine...

  17. Differential Gene Expression Profiles of PASMCs Induced by Quercetin under Hypoxia BioProject

    ID: PRJNA293394

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: (Ramp1, Ramp3, Adcy5, Gnas, Prkcd, Itpr3, Adra1d, Calm1, Npr1, Avpr1a, Ednra, Adcy8). Real-time quantitative RT-PCR was performed to verify the microarray results. In conclusion, quercetin altered the expression profile of many genes regulated by hypoxia in PASMCs, which helps to further explore the mechanism of the effects of quercetin treatment on hypoxic PAH. Overall design: G1(normoxia1,normoxia2,normoxia3),G2(hypoxia1,hypoxia2,hypoxia3)and G3(hypoxia+quercetin 1,hypoxia+quercetin 2,hypoxia+quercetin 3)...
  18. Genome-wide map of BACH1 binding in HEK 293T cells BioProject

    ID: PRJNA143131

    Keywords: Epigenomics

    Access Type: download

    dataset.description: fecting cell cycle and apoptosis pathways (ITPR2, CALM1, SQSTM1, TFE3, EWSR1, CDK6, BCL2L11, MAFG) as well as subcellular transport processes (CLSTN1, PSAP, MAPT, vault RNA). The newly identified impact of BACH1 on genes involved in neurodegenerative processes and proliferation provides an interesting basis for future dissection of BACH1-mediated gene repression in neurodegeneration and virus-induced cancerogenesis. Overall design: Examination of BACH1 binding in HEK 293T cells by chromatin immunoprecipitation-sequencing (CHIP-seq) with input DNA as control....
  19. GAG_HV1W2 UniProt:Swiss-Prot

    ID: P05889

    Description: in p7 Interaction with Gp41 Interaction with host CALM1 Interaction with host AP3D1 Interaction with membrane phosphatidylinositol 4,5-bisphosphate and RNA Interaction with membrane phosphatidylinositol 4,5-bisphosphate Interaction with host PPIA/CYPA and NUP153 PPIA/CYPA-binding loop D...

  20. Solution NMR structure of CaM bound to iNOS CaM binding domain peptide PDB

    ID: PDB:2LL6

    Description: Calmodulin, Nitric oxide synthase, inducible (E.C.1.14.13.39)

    gene.name: CALM1, CALM, CAM, CAM1, CALM2, CAM2, CAMB, CALM3, CALML2, CAM3, CAMC, CAMIII

Displaying 20 of 207 results for "CALM1"