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Displaying 20 of 20 results for "BCAS1"
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  1. Expression data from brains of BCAS1 knockout or wildtype mice BioProject

    ID: PRJNA356894

    Keywords: Transcriptome or Gene expression

    Access Type: download

  2. BCAS3_DROME UniProt:Swiss-Prot

    ID: Q8SY41

    Description: Breast carcinoma-amplified sequence 3 homolog WD 1 WD 2...

  3. Genomic Interaction Profiles in Breast Cancer Reveal Altered Chromatin Architecture BioProject

    ID: PRJNA214104

    Keywords: Other

    Access Type: download

  4. CAMK1D amplification implicated in epithelial-mesenchymal transition in basal-like breast cancer (aCGH) BioProject

    ID: PRJNA114177

    Keywords: Variation

    Access Type: download

  5. Genomic Interaction Profiles in Breast Cancer Reveal Altered Chromatin Architecture OmicsDI

    ID: E-GEOD-49521

    Date Released: 09-05-2013

    Description: In this study, we used IGFBP3, a gene involved in breast cancer pathogenesis, as bait in a 4C-seq experiment comparing normal breast cells (HMEC) with two breast cancer cell lines (MCF7, an ER positive cell line, and MDA-MB-231, a triple negative cell line). The IGFBP3 long-range interaction profile was substantially altered in breast cancer. Many interactions seen in normal breast cells are lost and novel interaction...

  6. Genomic Interaction Profiles in Breast Cancer Reveal Altered Chromatin Architecture ArrayExpress

    ID: E-GEOD-49521

    Description: In this study, we used IGFBP3, a gene involved in breast cancer pathogenesis, as bait in a 4C-seq experiment comparing normal breast cells (HMEC) with two breast cancer cell lines (MCF7, an ER positive cell line, and MDA-MB-231, a triple negative cell line). The IGFBP3 long-range interaction profile was substantially altered in breast cancer. Many interactions seen in normal breast cells are lost and novel interaction...

  7. CAMK1D amplification implicated in epithelial-mesenchymal transition in basal-like breast cancer (aCGH) ArrayExpress

    ID: E-GEOD-12813

    Description: n epithelial-mesenchymal transition in basal-like breast cancer Summary: Breast cancer exhibits clinical and molecular heterogeneity, where expression-profiling studies have identified five major molec...

  8. Deep Sequence Analysis of the Relationship between Gene Expression, CpG Island Methylation, and Gene Copy Number in Breast Cancer Cells ArrayExpress

    ID: E-GEOD-27003

    Description: tion status simultaneously in eight commonly used breast cell lines to develop a model for how these genomic features are integrated in estrogen receptor positive (ER+) and negative breast cancer. Total mRNA sequence, gene copy number, and genomic C...

  9. Positioning of Necrotic Lobular Intraepithelial Neoplasias within the sequence of breast carcinoma progression ArrayExpress

    ID: E-GEOD-14803

    Description: riant of intraepithelial lobular neoplasia of the breast composed of either uniform, generally small, cells (classic) with massive lobular distension, pleomorphic cells, signet-ring cells, or any cell type with necrosis. In contrast to classic forms of LI...

  10. Chromosome as oncogenic organizer: functional consequences of structural mutations in breast cancer (RNA-Seq) ArrayExpress

    ID: E-GEOD-57914

    Description: etermining the transcriptional landscape of human breast cancers. To assess the nature of these structural mutations, we analyzed a representative sampling of the major types of breast tumor samples for detailed structural...

  11. Synergistic activation by p38MAPK and glucocorticoid signaling mediates induction of M2-like tumor-associated macrophages expressing the novel CD20 ho... ArrayExpress

    ID: E-GEOD-38171

    Description: wth. Previously, we have described a special LYVE-1(+) M2 TAM subset in vitro and in vivo; gene profiling of this TAM subset identified MS4A8A as a novel TAM molecule expressed in vivo by TAM in mammary carcinoma and malignant melanoma. In vitro, Ms4a8a mRNA and MS4A8A p...

  12. Transcription profiling by high throughput sequencing of ZNF217 chromatin occupancy in the breast cancer cell genome ArrayExpress

    ID: E-GEOD-58326

    Description: inc finger protein, is located at 20q13 and found amplified and overexpressed in greater than 20% of breast tumors. Current studies indicate ZNF217 drives tumorigenesis, yet the regulatory mechanisms of ZNF21...

  13. Gene expression analysis of breast cancer cell-lines ArrayExpress

    ID: E-GEOD-45732

    Description: D1B histone H3 lysine 4 demethylase is frequently amplified and overexpressed in luminal breast tumors and a somatic point mutation of JARID1B leads to the gain of luminal-specific gene expression programs. Downregulation of JARID1B in luminal breast cancer cells induces the expression of basal cell-specific genes and growth arrest, which is par...

  14. Precursor and mature microRNA expression in MCF7 cells in hypoxia ArrayExpress

    ID: E-GEOD-49999

    Description: ffects on microRNA biogenesis proteins. Methods: Breast cancer cell lines were exposed to hypoxia and manipulations of hypoxia inducible factor (HIF) and HIF hydroxylase activity. The effects of hypoxia on the mRNA and protein levels of enzymes involved in microRNA biogenesis (Dicer, Drosha, TARPB2, DCGR8, XPO5) was determined by RT PCR and immunoblotting. The effect of hypoxia on microRNAs was...

  15. Transcription profiling by array time series of human MCF7 breast cancer cells treated with estradiol ArrayExpress

    ID: E-GEOD-11352

    Description: n receptor alpha (ERalpha) binding sites in MCF-7 breast cancer cells. We identified 1,234 high confidence binding clusters of which 94% are projected to be bona fide ERalpha binding regions. Only 5% of the mapped estrogen receptor binding sites are located within 5 kb upstream of the ...

  16. Synergistic activation by p38MAPK and glucocorticoid signaling mediates induction of M2-like tumor-associated macrophages expressing the novel CD20 ho... BioProject

    ID: PRJNA167359

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: wth. Previously, we have described a special LYVE-1(+) M2 TAM subset in vitro and in vivo; gene profiling of this TAM subset identified MS4A8A as a novel TAM molecule expressed in vivo by TAM in mammary carcinoma and malignant melanoma. In vitro, Ms4a8a mRNA and MS4A8A p...
  17. BET Bromodomain Protein BRD4 Regulates MEK Inhibitor-induced Kinome Reprogramming in Triple Negative Breast Cancer BioProject

    ID: PRJNA218091

    Keywords: Transcriptome or Gene expression

    Access Type: download

  18. Precursor and mature microRNA expression in MCF7 cells in hypoxia BioProject

    ID: PRJNA215772

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: ffects on microRNA biogenesis proteins. Methods: Breast cancer cell lines were exposed to hypoxia and manipulations of hypoxia inducible factor (HIF) and HIF hydroxylase activity. The effects of hypoxia on the mRNA and protein levels of enzymes involved in microRNA biogenesis (Dicer, Drosha, TARPB2, DCGR8, XPO5) was determined by RT PCR and immunoblotting. The effect of hypoxia on microRNAs was...
  19. Gene profile of breast cancers with immunohistochemical phenotypes of ER+/- and/or HER2+/- BioProject

    ID: PRJNA99585

    Keywords: Transcriptome or Gene expression

    Access Type: download

  20. Gene profile of breast cancers with immunohistochemical phenotypes of ER+/- and/or HER2+/- GEMMA

    ID: 2649

    Keywords: functional genomics

    Description: d growth factors accelerate cell proliferation of breast cancer cells, and these molecules are well investigated targets for drug development and application. The mechanisms of cell prolifera...


Displaying 20 of 20 results for "BCAS1"