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Displaying 20 of 167 results for "AGO4"
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  1. Small RNAs in Arabidopsis thaliana and its RISC complexes BioProject

    ID: PRJNA98719

    Keywords: Transcriptome or Gene expression

    Access Type: download

  2. MethylC-Seq of ago6-2, ago4-6 and ago4-6 ago6-2 double mutants BioProject

    ID: PRJNA243092

    Keywords: Epigenomics

    Access Type: download

  3. Arabidopsis Argonaute4, Argonaute6 and Argonaute9 associated small RNAs BioProject

    ID: PRJNA116171

    Keywords: Transcriptome or Gene expression

    Access Type: download

    dataset.description: We sequenced the small RNA bound to AGO4, AGO6 and AGO9 and compared these sRNAs to other libraries isolated such as total sRNAs, ago4 mutant, drd3-...
  4. Characterization of AGO1-/AGO4-associated smRNAs BioProject

    ID: PRJNA139119

    Keywords: Transcriptome or Gene expression

    Access Type: download

  5. Transcription profiling by array of Arabidopsis mutant for ago4 ArrayExpress

    ID: E-GEOD-18928

    Description: AGO4 plays an important role in RNA-directed DNA methylation (RdDM). RdDM on specific genomic loci have the potential to silence th...

  6. Arabidopsis Argonaute4, Argonaute6 and Argonaute9 associated small RNAs ArrayExpress

    ID: E-GEOD-16545

    Description: We sequenced the small RNA bound to AGO4, AGO6 and AGO9 and compared these sRNAs to other libraries isolated such as total sRNAs, ago4 mutant, drd3-...

  7. MethylC-Seq of ago6-2, ago4-6 and ago4-6 ago6-2 double mutants OmicsDI

    ID: E-GEOD-56388

    Date Released: 01-10-2015

    Description: resolution of DNA methylation status in ago6-2, ago4-6 and ago4-6 ago6-2 double mutants MethylC-Seq: 3 mutants examined, ago6-2, ago4-6 single mutant and ago4-6...

  8. RNA polymerase V targets transcriptional silencing components to promoters of protein-coding genes ArrayExpress

    ID: E-GEOD-35381

    Description: ation (RdDM) and heterochromatin formation. A key component of the Arabidopsis RdDM pathway is ARGONAUTE4 (AGO4), which associates with sizs to mediate DNA methylation. Here, we show that AGO4 preferentially targets transposable elements embedded within pr...

  9. AGO4 Regulates Entry into Meiosis and Influences Silencing of Sex Chromosomes in the Male Mouse Germline BioProject

    ID: PRJNA171334

    Keywords: Transcriptome or Gene expression

    Access Type: download

  10. AGO4 Regulates Entry into Meiosis and Influences Silencing of Sex Chromosomes in the Male Mouse Germline OmicsDI

    ID: E-GEOD-39652

    Date Released: 05-03-2014

    Description: The four mammalian Argonaute family members are thought to share redundant functions in the microRNA pathway, yet only AGO2 possesses the

  11. MethylC-Seq of ago6-2, ago4-6 and ago4-6 ago6-2 double mutants ArrayExpress

    ID: E-GEOD-56388

    Description: resolution of DNA methylation status in ago6-2, ago4-6 and ago4-6 ago6-2 double mutants MethylC-Seq: 3 mutants examined, ago6-2, ago4-6 single mutant and ago4-6...

  12. RNA polymerase V targets transcriptional silencing components to promoters of protein-coding genes BioProject

    ID: PRJNA152619

    Keywords: Epigenomics

    Access Type: download

    dataset.description: ation (RdDM) and heterochromatin formation. A key component of the Arabidopsis RdDM pathway is ARGONAUTE4 (AGO4), which associates with sizs to mediate DNA methylation. Here, we show that AGO4 preferentially targets transposable elements embedded within pr...
  13. Redundant AGO-hook platforms and AGO4-DNA interaction in polV-directed RdDM BioProject

    ID: PRJNA279272

    Keywords: Epigenomics

    Access Type: download

  14. Transcription profiling by array of Arabidopsis mutant for ago4 OmicsDI

    ID: E-GEOD-18928

    Date Released: 02-02-2012

    Description: AGO4 plays an important role in RNA-directed DNA methylation (RdDM). RdDM on specific genomic loci have the potential to silence th...

  15. AGO4 Regulates Entry into Meiosis and Influences Silencing of Sex Chromosomes in the Male Mouse Germline ArrayExpress

    ID: E-GEOD-39652

    Description: The four mammalian Argonaute family members are thought to share redundant functions in the microRNA pathway, yet only AGO2 possesses the

  16. A Dicer-Independent Route for Biogenesis of siRNAs that Direct DNA Methylation in Arabidopsis ArrayExpress

    ID: E-GEOD-74398

    Description: Dicer-like 3 (DCL3) and loaded into the effector Argonaute 4 (AGO4). Here we report a distinct class of siRNAs independent of DCLs (sidRNAs). sidRNAs are present as ladders of ~20 to 60nt in length, often having same 5' ends but differing in 3' ends by 1-nt steps. We further show that sidRNAs are associated with AGO4 and capable of directing DNA methylation...

  17. Arabidopsis AGO3 predominantly recruits 24-nucleotide small RNAs to regulate epigenetic silencing [Bisulfite-seq] BioProject

    ID: PRJNA312589

    Keywords: Epigenomics

    Access Type: download

    dataset.description: -bound 24-nt sRNAs overlapped with those bound to AGO4 and over 60% of AGO3-associated 24-nt sRNA enriched loci were identical to those of AGO4. In addition, expression of AGO3 driven by AGO4 native promoter partially complemented AGO4 function and rescued DNA methylation defect in ago4
  18. RNA polymerase V targets transcriptional silencing components to promoters of protein-coding genes OmicsDI

    ID: E-GEOD-35381

    Date Released: 06-02-2014

    Description: ation (RdDM) and heterochromatin formation. A key component of the Arabidopsis RdDM pathway is ARGONAUTE4 (AGO4), which associates with sizs to mediate DNA methylation. Here, we show that AGO4 preferentially targets transposable elements embedded within pr...

  19. Arabidopsis thaliana : Genome-Wide Identification of Small RNAs that Are Independent of DCL Proteins in Arabidopsis BioProject

    ID: PRJNA291944

    Keywords: epigenomics

    Access Type: download

    dataset.description: Dicer-like 3 (DCL3) and loaded into the effector Argonaute 4 (AGO4). Here we identified a distinct class of siRNAs independent of DCLs (sidRNAs). sidRNAs are present as ladders of ~20 to 60 nt in length, often having same 5’ ends but differing in 3’ ends by 1-nt steps. We further show that sidRNAs are associated with AGO4 and capable of directing DNA me...
  20. Characterization of AGO1-/AGO4-associated smRNAs OmicsDI

    ID: E-GEOD-28591

    Date Released: 04-03-2013

    Description: ully characterize smRNAs associated with AGO1 and AGO4, we developed a two-step protocol to purify AGO/smRNA complexes from flowers, leaves, roots and seedlings with enhanced purity, an...


Displaying 20 of 167 results for "AGO4"