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  1. GitHub repository gitter-lab/pria_lifechem software archive CEDAR

    Description: Virtual screening on PriA-SSB and RMI-FANCM with the LifeChem library.

  2. genome-analysis-workflows CWL workflow definitions for executing MGI analysis pipelines CEDAR

    Description: CWL and docker based pipelines for analysis of high-throughput sequence data on local or cloud compute

  3. Cerebral Cortex cloud platform example code CEDAR

    Description: Example code that to demonstrate the capabilities of the Cerebral Cortex Kernel

  4. DEEPEST-Fusion CEDAR

    Description: This is a statistical fusion detection algorithm particularly engineered for screening big RNA sequencing databases

  5. Tools and workflow to produce VCF files from BAM files using Google Cloud Pipelines CEDAR

    Description: Although Google Cloud Genomics and Sentieon pipelines support robust tools to obtain high quality VCFs from BAM files, obtaining VCF files from these ...

  6. Processed ATAC-seq from dorsolateral-prefrontal cortex in adult brain CEDAR

    Description: Processed data ATAC-seq data from 341 samples from dorsolateral-prefrontal cortex samples of individuals with schizophrenia and control

  7. iTextMine CEDAR

    Description: iTextMine is an Integrated Text Mining System for Large Scale Knowledge Extraction from Literature. The system employs parallel processing for dockeri...

  8. OpenNeuro-processed CEDAR

    Description: OpenNeuro dataset processed with various neuroimaging tools and pipelines

  9. Regtools software CEDAR

    Description: Source code for the regtools application

  10. Protein Ontology (PRO) CEDAR

    Description: Protein Ontology (PRO) provides an ontological representation of protein-related entities by explicitly defining them and showing the relationships be...

  11. GTEx exon-exon-junction-level expression summary for Snaptron CEDAR

    Description: GTEx exon-exon-junction-level expression summary from the Snaptron collection. Format is a tab-separated text file compressed and indexed using BGZip...

  12. LungCT-Diagnosis TCIA

    ID: LungCT-Diagnosis

    Date Released: 12-30-2014

  13. Soft-tissue-Sarcoma TCIA

    ID: Soft-tissue-Sarcoma

    Date Released: 06-01-2015

  14. TCGA-THCA TCIA

    ID: TCGA-THCA

    Date Released: 12-31-2014

  15. PROSTATEx TCIA

    ID: PROSTATEx

    Date Released: 03-30-2017

  16. TCGA-BLCA TCIA

    ID: TCGA-BLCA

    Date Released: 01-30-2017

  17. TCGA-SARC TCIA

    ID: TCGA-SARC

    Date Released: 12-30-2014

  18. TCGA-COAD TCIA

    ID: TCGA-COAD

    Date Released: 10-14-2014

  19. TCGA-LUAD TCIA

    ID: TCGA-LUAD

    Date Released: 01-30-2017

  20. RIDER Breast MRI TCIA

    ID: RIDER Breast MRI

    Date Released: 11-08-2011


Displaying 20 of 125 results for " "