biomedical and healthCAre Data Discovery Index Ecosystem
biomedical and healthCAre Data Discovery Index Ecosystem
ID: doi:10.6072/H0.MP.A004267.01
Release Date: 06-17-2016
Tyrosine-protein phosphatase non-receptor type 2 NSGM
ID: doi:10.6072/H0RN35SK
Release Date: 06-17-2016
Rheumatoid arthritic synovium response to rituximab GEO
ID: geo.datasets:GDS4903
Description: Analysis of synovial biopsy samples from anti-TNF resistant rheumatoid arthritis (RA) patients 12 wks after the start of rituximab (RTX) therapy. RTX ...
Types: Expression profiling by array
Instrument: GPL570
Neuroblastoma SKNAS induced cancer stem cells GEO
ID: geo.datasets:GDS4618
Description: Analysis of phenotypically stabilized stem cell-like NB cells (iCSCs) established from SKNAS NB cells by DNA methylation inhibitor 5-aza-2’-deoxycyt...
Types: Expression profiling by array
Instrument: GPL570
HUVECs infected with Staphylococcus aureus isolates from blood and anterior nares GEO
ID: geo.datasets:GDS4030
Description: Analysis of human umbilical vein endothelial cells (HUVECs) infected with S. aureus from nares of healthy carriers or from blood of septic patients (i...
Types: Expression profiling by array
Instrument: GPL570
Cerebral Palsy: skeletal muscle biopsies GEO
ID: geo.datasets:GDS4353
Description: Analysis of gracilis and semitendinosus muscle biopsies from pediatric cerebral palsy (CP) patients. Muscles from CP patients are spastic and form con...
Types: Expression profiling by array
Instrument: GPL571
Squamous cell carcinoma of the tongue: tumors and histologically normal surgical margins GEO
ID: geo.datasets:GDS4562
Description: Analysis of oral carcinoma, histologically normal margins, and adjacent normal tissues from patients with squamous cell carcinoma (OSCC) of the tongue...
Types: Expression profiling by array
Instrument: GPL10526
ID: geo.datasets:GDS4914
Description: Analysis of lungs of females exposed to 50 ppm arsenate (As) for 90 days. Results compared with those from bisulfite sequencing in order to provide in...
Types: Expression profiling by array
Instrument: GPL1261
Bacterial cell wall component MDP effect on HEK293 cells expressing Crohn's disease-associated NOD2 variant L1007fsinsC receptor: time course GEO
ID: geo.datasets:GDS4416
Description: Temporal analysis of HEK293 cells stably-expressing wildtype NOD2 receptor or variant NOD2L1007fsinsC and treated with muramyl dipeptide (MDP). MDP-in...
Types: Expression profiling by array
Instrument: GPL570
Adriamycin in vitro effect on Eµ-myc transgenic lymphoma cells deficient in Suv39h1 GEO
ID: geo.datasets:GDS4983
Description: Analysis of lymphoma cells isolated from Eµ-myc mice deficient in H3K9 histone methyltransferase Suv39h1 and treated in vitro with anticancer drug AD...
Types: Expression profiling by array
Instrument: GPL1261
Desiccation stress: time course GEO
ID: geo.datasets:GDS4552
Description: Analysis of adult females exposed to 30% (desiccated) relative humidity for up to 36 hrs. The An. gambiae malaria vector populations are observed year...
Types: Expression profiling by array
Instrument: GPL1321
Tamoxifen-resistant breast cancer cell line MCF7 subclones GEO
ID: geo.datasets:GDS4051
Description: Analysis of tamoxifen-sensitive and -resistant subclones of breast tumor MCF7 cells treated with estrogen (E), 4-hydroxy-tamoxifen (4-OHT), or E + 4-O...
Types: Expression profiling by array
Instrument: GPL570
Model of HIV-associated pulmonary arterial hypertension: right superior lobe of lung GEO
ID: geo.datasets:GDS4229
Description: Analysis of lung from 3 month old, human immunodeficiency virus (HIV)-transgenic F344 males. The HIV-transgenics display pulmonary hypertension and pu...
Types: Expression profiling by array
Instrument: GPL1355
Genetic reprogramming of prostate cancer-associated stromal cells GEO
ID: geo.datasets:GDS4124
Description: Analysis of induced pluripotent stem cells (iPSCs) obtained from sorted CD90+ prostate cancer (CP)-associated stromal cells cultured and transfected w...
Types: Expression profiling by array
Instrument: GPL570
Transcription factor Yin Yang 1 deficiency effect on the skeletal muscle GEO
ID: geo.datasets:GDS4856
Description: Analysis of the soleus muscles of transcription factor Yin Yang 1 (YY1) deficient animals. Many nuclear genes encoding mitochondrial proteins contain ...
Types: Expression profiling by array
Instrument: GPL8321
Wild type embryonic lens development GEO
ID: geo.datasets:GDS4452
Description: Analysis of lens from ICR embryos at 3 key developmental stages in the transition from E10.5 lens placode invagination to E12.5 lens primary fiber cel...
Types: Expression profiling by array
Instrument: GPL1261
Large RS-like factor SON knockdown effect in HeLa cervical cancer cell line GEO
ID: geo.datasets:GDS4448
Description: Analysis of HeLa cells depleted of SON, a large Ser/Arg (SR)-related protein localized in nuclear speckles. SON depletion severely impairs spindle pol...
Types: Expression profiling by array
Instrument: GPL571
Exercise effect on high capacity runners (HCR) and low capacity runners (LCR): skeletal muscle GEO
ID: geo.datasets:GDS4035
Description: Analysis of soleus muscle of animals artificially selected for high and low inborn maximal oxygen uptake (VO2max) that were subjected to exercise-trai...
Types: Expression profiling by array
Instrument: GPL1355
Simian Immunodeficiency Virus infection effect on lymph nodes of Sooty mangabeys and Rhesus macaques GEO
ID: geo.datasets:GDS4223
Description: Temporal analysis of lymph nodes of SIVsmm infected Sooty mangabeys (SM) and SIVmac239 infected Rhesus macaques (RM). SIVsmm is non-pathogenic to host...
Types: Expression profiling by array
Instrument: GPL3535
Lysophosphatidic acid effect on breast and prostate cancer cell lines GEO
ID: geo.datasets:GDS4951
Description: Analysis of MDA-MB-231, MCF7 and PC3 cells treated with lysophosphatidic acid (LPA). LPA activates six different G protein-coupled receptors (LPA rece...
Types: Expression profiling by array
Instrument: GPL570