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Dataset Title Keywords Date Released Description
Genome-wide identification of bZIP29 & bZIP69 target genes in Arabidopsis cell cultures ChIP-seq 09-25-2016 Two Arabidopsis basic leucine zipper TFs (bZIP29 and bZIP69) of the bZIP group I TF family, expresse...
Transcription profiling of Set2 deletion in yeast to investigate how H3K36 methylation affects mRNA transcription during carbon source shifts transcription profiling by array 09-25-2016 H3K36 methylation by Set2 targets Rpd3S histone deacetylase to 3’ transcribed regions, repressing ...
Identification of proteins interacting with lncRNA Braveheart in mouse using protein microarray proteomic profiling by array 09-25-2016 The mouse lncRNA Braveheart (Bvht) as a non-coding transcript has been found to act in trans to regu...
Genome-wide transcriptome analysis bZIP29 dominant negative repressor line in root tips of Arabidopsis RNA-seq of coding RNA 09-25-2016 Two Arabidopsis basic leucine zipper TFs (bZIP29 and bZIP69) of the bZIP group I TF family, expresse...
Transcription profiling by array of FOXP3 overexpression in resting and activated mouse CD4+ T cells transcription profiling by array 09-24-2016 Foxp3-mediated gene expression program in resting vs. activated CD4+ T cells The microarray part of ...
Genotyping of SNP array in individuals with San ancestry in southeastern Africa genotyping by array 09-22-2016 Only a few scattered groups with oral traditions of Khoe-San hunter-gatherer ancestry remain in sout...
eRah: A computational tool integrating spectral deconvolution and alignment with quantification and identification of metabolites in GCMS- based metabolomics N/A 09-22-2016 Gas chromatography coupled to mass spectrometry (GC-MS) has been a long- standing approach used for ...
Whole-islet RNA-sequencing analysis of human pancreas from healthy individuals and type 2 diabetes patients RNA-seq of coding RNA 09-22-2016 We performed whole-islet RNA-sequencing of human pancreatic islets from healthy and T2D individuals ...
Single-cell RNA-seq analysis of human pancreas from healthy individuals and type 2 diabetes patients RNA-seq of coding RNA from single cells 09-22-2016 We used single-cell RNA-sequencing to generate transcriptional profiles of endocrine and exocrine ce...
The RNA binding protein SYNCRIP is a component of the hepatocyte exosomal machinery controlling microRNAs sorting RNA-seq of non coding RNA 09-21-2016 Despite clear evidence that exosomal microRNAs (miRNAs) are able to modulate the cellular microenvir...
Transcriptome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone). transcription profiling by array 09-20-2016 We classified samples and deciphered a key genes signature of intratumor heterogeneity by Principal ...
Methylome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone). methylation profiling by array 09-20-2016 We classified samples and deciphered a key genes signature of intratumor heterogeneity by Principal ...
aCGH profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone). comparative genomic hybridization by array 09-20-2016 We classified samples and deciphered a key genes signature of intratumor heterogeneity by Principal ...
Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment RNA-seq of coding RNA 09-19-2016 We used RNA-seq platform to determine role of a splicing factor RBM25 in regulation of gene expressi...
Transcription profiling by high throughput sequencing of seven tissues of Brassica oleracea RNA-seq of coding RNA 09-19-2016 Deep sequencing of mRNA from seven different tissues of Brassica oleracea Analysis of ploy(A)+ RNA o...
RNA-seq analysis of Helicobacter cinaedi ATCC BAA-847 under microaerobic and aerobic culture conditions RNA-seq of coding RNA 09-19-2016 Helicobacter cinaedi is an emerging bacterial pathogen of immunosuppressed individuals. The species...
Transcription profiling by array of Escherichia coli O157:H7 Sakai subjected to an abrupt downshift in temperature and water activity at multiple time points transcription profiling by array 09-16-2016 This experiment contains the transcriptomic dataset that constitutes part of an integrated transcrip...
Knockdown of SR protein family in P19 cells and RNA-seq of cytoplasmic and whole cell polyA+ RNA RNA-seq of coding RNA 09-15-2016 Our data suggest that all SR proteins contribute to mRNA export via NXF1. To identify endogenous exp...
Genomic analyses of breast cancer cells: 17β-hydroxysteroid dehydrogenase type 1 induces transcriptional changes in estradiol-dependent and independent manners transcription profiling by array 09-14-2016 17β-HSD1 expression modulates T47D transcript profile in in steroid-deprived medium. The enzyme spe...
ROSA26Foxf1; Tie2-cre lung gene expression analysis. transcription profiling by array 09-14-2016 Analysis of genes deregulated due to heterozygous overexpression of Foxf1 in endothelial and hematop...