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Dataset Title Keywords Date Released Description
A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (ChIP-Seq) ChIP-seq 08-19-2015 Epigenetic dysregulation has emerged as an important mechanism in cancer. Alterations in epigenetic...
Tbx3 controls Dppa3 levels to regulate exit from pluripotency towards mesodermal lineage RNA-seq of coding RNA
ChIP-seq
08-19-2015 Tbx3, a member of the T-box family, plays important roles in development, stem cells, nuclear reprog...
MeCP2 binds to mCH as neurons mature, influencing transcription and onset of Rett syndrome [Mnase-Seq] ChIP-seq 08-19-2015 The postnatal neurodevelopmental disorder Rett syndrome (RTT) is caused by mutations in the gene enc...
Fgf and Esrrb integrate epigenetic and transcriptional networks that regulate self-renewal of Trophoblast Stem Cells RNA-seq of coding RNA
ChIP-seq
08-18-2015 Derivation and maintenance of TS cells depends on the presence of Fgf signalling. Numerous gene knoc...
A simple method for generating high-resolution maps of genome wide protein binding ChIP-seq 06-21-2015 Chromatin immunoprecipitation (ChIP) and its derivatives are the main techniques used to determine t...
A MYC-driven change in mitochondrial dynamics limits stem cell properties of mammary epithelial cells (ChIP-seq) ChIP-seq 12-08-2015 In several developmental lineages, an increase in expression of the MYC proto-oncogene drives the tr...
Phosphorylation of an HP1-like protein regulates RNA-bridged heterochromatin body assembly for DNA elimination other
ChIP-seq
12-11-2015 This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Genome-wide DNA-binding profile of the Vibrio cholerae histone-like nucleoid structuring protein (H-NS) ChIP-seq 08-19-2015 The cholera disease bacterium V. cholerae, can adopt planktonic or biofilm lifestyles depending on t...
Oct4 binding and Histone modification profiling during OSKM-mediated 2nd reprogramming ChIP-seq 01-03-2016 Forced expression of four transcription factors Oct4,Sox2, Klf4 and Myc (OSKM) induces somatic cell ...
Cryptochromes interact directly with PIFs to control plant growth in limiting blue light ChIP-seq 01-01-2016 Sun-loving plants have the ability to detect and avoid shading through sensing of both blue and red ...
Models of Human Core Transcriptional Regulatory Circuitries ChIP-seq 12-27-2015 A small set of core transcription factors (TFs) dominates control of the gene expression program in ...
Expression data from 9-day-old and 21-day-old rat Sertoli cell. ChIP-chip by array 01-10-2016 9-day-old Sertoli cells have a stronger proliferative activity compared with 21-day-old Sertoli cell...
NSD3-short is an adaptor protein that couples BRD4 to the CHD8 chromatin remodeler RNA-seq of coding RNA
ChIP-seq
12-18-2015 This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Genome-wide mapping of Mef2c-bound sites in early B-cell progenitors ChIP-seq 12-19-2015 The sequential activation of distinct developmental gene networks governs the ultimate identity of a...
Genome-wide occupancy of Rif1FH in mouse ESC ChIP-seq 12-15-2015 Mammalian Rif1 defines the architecture of replication-timing domains interactions through the three...
IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development transcription profiling by array
ChIP-chip by tiling array
12-19-2015 This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
IRF4, a master transcription factor, regulates genes involved in BCR signaling, antigen processing and presentation, and GC development [ChIP-chip] ChIP-chip by tiling array 12-19-2015 Interferon regulatory factor 4 (IRF4) is a master transcription factor required for the maturation o...
MLL-rearranged acute lymphoblastic leukemias upregulate BCL-2 through H3K79 methylation and are highly sensitive to the BCL-2 specific antagonist ABT-199 ChIP-seq 12-18-2015 We present ChIP-seq in the t(4;11) cell line SEM for different components of the MLL-AF4 complex as ...
Identification of MEF2B, EBF1, and IL6R as chromosome bound targets of EBNA1 essential for EBV infected B-lymphocyte survival RNA-seq of coding RNA
ChIP-seq
12-19-2015 EBNA1 is the EBV-encoded nuclear antigen required for viral episome maintenance during latency. EBN...
NSD3-short is an adaptor protein that couples BRD4 to the CHD8 chromatin remodeler (ChIP-Seq) ChIP-seq 12-18-2015 The bromodomain and extraterminal (BET) protein BRD4 is a therapeutic target in acute myeloid leukem...