Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Repositories
  • CCDC (656,223)
  • UniProt:Swiss-Prot (438,182)
  • BioProject (226,434)
  • Figshare (192,552)
  • PDB (131,204)
  • Dryad (100,545)
  • OmicsDI (78,201)
  • ArrayExpress (69,996)
  • Dataverse (60,303)
  • NeuroMorpho.Org (50,356)
    • SRA (43,089)
    • CIL (10,226)
    • ICPSR (9,857)
    • UKDA (8,799)
    • PeerJ (6,214)
    • GeneNetwork (4,595)
    • Zenodo (4,544)
    • GEO (4,348)
    • ProteomeXchange (3,397)
    • RGD (3,247)
    • PDBe:EMDB (2,367)
    • GEMMA (2,285)
    • GTex (1,622)
    • BMRB (1,490)
    • VectorBase (1,445)
    • NITRCIR (1,391)
    • NeuroVault:Cols (1,154)
    • GND (1,018)
    • dbGaP (979)
    • MorphoBank (828)
    • NURSA (547)
    • Retina (384)
    • MPD (376)
    • Metabolomics (362)
    • NeuroVault:NIDM (353)
    • SBGrid (328)
    • GigaDB (319)
    • SimTK (305)
    • LINCS (287)
    • ImmPort (222)
    • Scientific Data (193)
    • NIDDKCR (151)
    • Epigenomics (128)
    • LSHTM (118)
    • NIMH (98)
    • MITLCP (93)
    • Thieme (87)
    • PhysioBank (82)
    • PeptideAtlas (75)
    • Databrary (74)
    • TCIA (71)
    • CRCNS (71)
    • Ndar Papers (65)
    • openfMRI (55)
    • LSDB (55)
    • CEDAR (54)
    • CXIDB (52)
    • Adaptive Biotechnologies (49)
    • GDC (39)
    • UCSF-CTSI (32)
    • CVRG (29)
    • YPED (27)
    • JHUDMS (23)
    • FDZ-DZA (21)
    • NeuroVault:Atlases (18)
    • Wormbase (11)
    • NSGM (10)
    • NSRR (10)
    • ADA (9)
    • CANDI (3)
    • BILS (1)
    • MBF (1)
    • CTN (51)
    • ClinicalTrials.gov (5,667)
    • ClinVar (208,560)
Clear All Filters

Feedback?

If you are having problems using our tools, or if you would just like to send us some feedback, please post your questions on GitHub.

Displaying 20 of 154 results for " "
i
Switch View:
Sorted By:
Dataset Title Dataset ID Primary Publications Keywords
HLA-B*57:01-RVAQLENVYI in complex with abacavir PDB:3VRI Immune self-reactivity triggered by drug-modified HLA-peptide repertoire
IMMUNE SYSTEM
Human leukocyte antigen
antigen presentation
immune system
T-cell receptor
Structural basis for degenerate recognition of HIV peptide variants by cytotoxic lymphocyte, variant SL9-6I PDB:1T20 Structural Basis for Degenerate Recognition of Natural HIV Peptide Variants by Cytotoxic Lymphocytes.
IMMUNE SYSTEM
CTL
CYTOTOXIC T LYMPHOCYTES
HIV
HUMAN IMMUNODEFICIENCY VIRUS
MHC
MAJOR HISTOCOMPATIBILITY COMPLEX
PMHC
PEPTIDE MHC COMPLEX
RMSD
ROOT-MEAN-SQUARED DEVIATION
SIV
SIMIAN IMMUNODEFICIENCY VIRUS
TCR
T-CELL RECEPTOR
IMMUNE SYSTEM
Structure of HLA-A68 complexed with an HIV derived peptide PDB:4HWZ Structural basis for the differential classification of HLA-A*6802 and HLA-A*6801 into the A2 and A3 supertypes
IMMUNE SYSTEM
HLA molecules
peptide presentation
IMMUNE SYSTEM
Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity PDB:2F54 Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity.
IMMUNE SYSTEM
T-cell receptor
CDR2
Phage display
wild type sequence
high affinity
NY-ESO-1
IMMUNE SYSTEM
Beta2 microglobulin mutant H31Y displays hints for amyloid formations PDB:1PY4 beta2-microglobulin H31Y variant 3D structure highlights the protein natural propensity towards intermolecular aggregation
SIGNALING PROTEIN
amyloid
Dialysis related amyloidosis
C-type immunoglobulin
protein mutant
SIGNALING PROTEIN
Crystal Structures of High Affinity Human T-Cell Receptors Bound to pMHC RevealNative Diagonal Binding Geometry TCR Clone C5C1 Complexed with MHC PDB:2PYE Crystal structures of high affinity human T-cell receptors bound to peptide major histocompatibility complex reveal native diagonal binding geometry
IMMUNE SYSTEM
T-CELL RECEPTOR
CDR3
PHAGE DISPLAY
MUTANT
HIGH AFFINITY
NY-ESO-1
IMMUNE SYSTEM
A regulatable switch mediates self-association in an immunoglobulin fold PDB:3CIQ A regulatable switch mediates self-association in an immunoglobulin fold.
IMMUNE SYSTEM
class-1 MHC
amyloid
protein folding
dialysis-related amyloidosis
beta-2 microglobulin
Disease mutation
Glycation
Glycoprotein
Immune response
Immunoglobulin domain
MHC I
Pyrrolidone carboxylic acid
Secreted
IMMUNE SYSTEM
Crystal structures of the murine class I major histocompatibility complex H-2Kb in complex with LCMV-derived gp33 index peptide and three of its escape variants PDB:1S7Q Determination of structural principles underlying three different modes of lymphocytic choriomeningitis virus escape from CTL recognition.
IMMUNE SYSTEM
LCMV
MHC class I
immune escape
IMMUNE SYSTEM
Mhc Class I Natural Mutant H-2Kbm8 Heavy Chain Complexed With beta-2 Microglobulin and Herpies Simplex Virus Mutant Glycoprotein B Peptide PDB:1RJZ Structural Basis for the Restoration of TCR Recognition of an MHC Allelic Variant by Peptide Secondary Anchor Substitution
IMMUNE SYSTEM
MHC
class I
virus
TCR
herpes
IMMUNE SYSTEM
Crystal structure of the Murine class I Major Histocompatibility Complex of H-2DB, B2-Microglobulin, and A 9-Residue immunodominant peptide epitope gp33 derived from LCMV PDB:1N5A A Structural Basis for LCMV Immune Evasion. Subversion of H-2D(b) and H-2K(b) Presentation of gp33 Revealed by Comparative Crystal Structure Analyses.
IMMUNE SYSTEM
Murine MHC
viral escape
LCMV
immunodominant epitope
IMMUNE SYSTEM
rhesus macaque MHC class I molecule Mamu-B*17-IW11 PDB:3RWD Structural basis of diverse peptide accommodation by the rhesus macaque MHC class I molecule Mamu-B*17: insights into immune protection from simian immunodeficiency virus
IMMUNE SYSTEM
antigenic peptides
T lymphocytes
immune response
IMMUNE SYSTEM
Crystal structure of Melanoma Antigen gp100(209-217) Bound to Human Class I MHC HLA-A2 PDB:1TVB Increased Immunogenicity of an Anchor-Modified Tumor-Associated Antigen Is Due to the Enhanced Stability of the Peptide/MHC Complex: Implications for Vaccine Design
IMMUNE SYSTEM
Melanoma; X-ray; gp100; peptide; MHC; HLA-A2
IMMUNE SYSTEM
HLA-B*2705 bound to nona-peptide m9 PDB:1JGE HLA-B27 subtypes differentially associated with disease exhibit subtle structural alterations
IMMUNE SYSTEM
MHC (Major Histocompatibility Complex)
HLA (Human Leukocyte Antigen)
IMMUNE SYSTEM
H-2Db complex with murine gp100 PDB:3CCH Design of agonistic altered peptides for the robust induction of CTL directed towards H-2Db in complex with the melanoma-associated epitope gp100.
IMMUNE SYSTEM
murine MHC
Glycoprotein
Immune response
Membrane
MHC I
Transmembrane
Disease mutation
Melanin biosynthesis
IMMUNE SYSTEM
Structure of MHC-class I related molecule MR1 PDB:4GUP MR1 presents microbial vitamin B metabolites to MAIT cells
IMMUNE SYSTEM
MHC Class I-related protein
IMMUNE SYSTEM
Human Class I MHC HLA-A2 in complex with the native nonameric Melan-A/MART-1(27-35) peptide PDB:2GUO Structures of MART-1(26/27-35) Peptide/HLA-A2 Complexes Reveal a Remarkable Disconnect between Antigen Structural Homology and T Cell Recognition
IMMUNE SYSTEM
Melan-A/MART-1 peptide
nonapeptide
MHC class I
HLA-A2
melanoma
cancer vaccines
IMMUNE SYSTEM
Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides PDB:3QQ4 Crystal structure of swine major histocompatibility complex class I SLA-1 0401 and identification of 2009 pandemic swine-origin influenza A H1N1 virus cytotoxic T lymphocyte epitope peptides.
IMMUNE SYSTEM
Swine MHC Class 1
SLA-1*0401
Epitope of Ebola virus
IMMUNE SYSTEM
HLA-A24 in complex with HIV-1 Nef134-10(2F) PDB:3VXO Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection
IMMUNE SYSTEM
HIV-1
NEF
IMMUNE SYSTEM
HLA-A24
MHC CLASS I
IMMUNOGLOBURIN DOMAIN
MHC
IMMUNE ESPONSE
The complex between H27-14 TCR and HLA-A24 bound to HIV-1 Nef134-10(wt) peptide PDB:3VXR Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection
IMMUNE SYSTEM
HIV-1
NEF
IMMUNE SYSTEM
HLA-A24
T CELL RECEPTOR
MHC CLASS I
IMMUNOGLOBURIN DOMAIN
TCR
MHC
IMMUNE RESPONSE
The complex between T36-5 TCR and HLA-A24 bound to HIV-1 Nef134-10(2F) peptide PDB:3VXU Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection
IMMUNE SYSTEM
HIV-1
NEF
IMMUNE SYSTEM
HLA-A24
T CELL RECEPTOR
MHC CLASS I
IMMUNOGLOBURIN DOMAIN
TCR
MHC
IMMUNE RESPONSE