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Dataset Title Keywords Date Released Description
RNA-seq influenza infected B6 & D2 mice RNA-seq of coding RNA 08-19-2015 The host response to influenza A infections is strongly influenced by host genetic factors. Animal m...
A survey of human brain transcriptome diversity at the single cell level RNA-seq of coding RNA 08-19-2015 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and ...
Droplet barcoding for single cell transcriptomics applied to embryonic stem cells RNA-seq of coding RNA 08-19-2015 Recently, RNA sequencing has achieved single cell resolution, but what is limiting is an effective w...
RNA-sequencing in OS-RC-2 cells under the knockdown of Arkadia or ESRP2 RNA-seq of coding RNA 08-19-2015 Tumor-specific alternative splicing is implicated in the progression of cancer, including clear cell...
A human fetal transcriptional atlas RNA-seq of coding RNA 08-19-2015 Gene expression is highly dynamic during fetal development and determines tissue specification and f...
Comparative transcriptomic analysis of self-organized, in vitro generated optic tissues RNA-seq of coding RNA 08-19-2015 Embryonic stem (ES) cells have a remarkable capacity to self-organize complex, multi-layered optic c...
Identification of novel, highly expressed retroviral microRNAs in cells infected by bovine foamy virus RNA-seq of non coding RNA 08-19-2015 While numerous viral microRNAs (miRNAs) expressed by DNA viruses, especially herpesvirus family memb...
Gene expression changes in control- and shSamd14-infected R1 fetal liver RNA-seq of coding RNA 06-12-2015 Samd14 was discovered as a novel GATA-2 target gene. Samd14 increased hematopoietic progenitor leve...
Gene expression analysis of human haploid cells (HAP1) depleted of SMARCB1 and SMARCA4 RNA-seq of coding RNA 09-12-2016 The aim of this study is to analyze the change in genome wide expression levels in HAP1 cells upon l...
The RNA binding protein SYNCRIP is a component of the hepatocyte exosomal machinery controlling microRNAs sorting RNA-seq of non coding RNA 09-21-2016 Despite clear evidence that exosomal microRNAs (miRNAs) are able to modulate the cellular microenvir...
Transcription profiling by high throughput sequencing of Arabidopsis rbm25-1 mutant seedlings before and after abscisic acid treatment RNA-seq of coding RNA 09-19-2016 We used RNA-seq platform to determine role of a splicing factor RBM25 in regulation of gene expressi...
Transcriptome Sequencing and Assembly of Canna indica Flower RNA-seq of coding RNA 09-12-2016 Canna indica L. is an ornamental plant with petaloid staminodes and only a half fertile stamen in it...
Transcriptome analysis of 6 hours post fertilization mecp2-null versus wild type zebrafish embryos RNA-seq of coding RNA 09-12-2016 RNA sequencing was performed on RNA isolated from groups of 6 hpf wild type and mecp2-null embryos (...
CXCL12/CXCR4 signaling mediates niche occupancy and tumor maintenance in T-cell leukemia RNA-seq of coding RNA 08-19-2015 T-cell acute lymphoblastic leukemia (T-ALL) is an aggressive hematological malignancy characterized ...
Memory-like CD8 T-cells sustain the immune response to chronic viral infections. RNA-seq of coding RNA 09-12-2016 We have discovered a small subpopulation of virus-specific CD8 T-cells that sustains the T-cell resp...
HER2 expression identifies dynamic functional states within circulating breast cancer cells RNA-seq of coding RNA 09-12-2016 Circulating tumour cells in women with advanced oestrogen-receptor (ER)-positive/human epidermal gro...
Phenotype and RNA-Seq-Based Transcriptome Profiling of Staphylococcus aureus biofilms in response to Tea tree oil RNA-seq of coding RNA 09-12-2016 RNA sequencing (RNA-Seq) was used in our study to elucidate the mechanism of Tea tree oil (TTO) as a...
Transcription profiling by high throughput sequencing of seven tissues of Brassica oleracea RNA-seq of coding RNA 09-19-2016 Deep sequencing of mRNA from seven different tissues of Brassica oleracea Analysis of ploy(A)+ RNA o...
Different molecular pathways along with pathogenesis of three subtypes of Leiomyosarcoma RNA-seq of coding RNA 08-19-2015 Leiomyosarcoma (LMS) is a malignant neoplasm of smooth muscle and is an aggressive soft tissue tumor...
Genome-wide identification of Drought-responsive Regulatory Coding and Non-coding Transcripts from Oryza sativa L. by deep RNA sequencing RNA-seq of coding RNA
RNA-seq of non coding RNA
09-12-2016 Abiotic environmental stresses cause serious economic losses in agriculture. These stresses include ...