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Dataset Title Keywords Date Released Description
Global transcript analysis of quantitative trait loci (QTL) associated with meat tenderness in pigs RNA-seq of coding RNA 12-12-2015 We sequenced mRNA from 32 muscles (n=16 semimembranosus,n=16 longisimus dorsi) of two pig breeds (Pu...
Differential RNA-seq of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42 Reveals sRNA Bas01 involved in Sporulation and Biofilm Formation RNA-seq of coding RNA 12-08-2015 Bacillus amyloliquefaciens FZB42 is a representative organism for Gram positive soil bacteria associ...
Identifying Glioblastoma Gene Networks Based on Hypergeometric Test Analysis RNA-seq of coding RNA 12-08-2015 Patient specific therapy is emerging as an important possibility for many cancer patients. However,...
RNA-seq analysis of Bacteroides xylanisolvens XB1AT grown on pectin or xylan RNA-seq of coding RNA 12-08-2015 Dietary fiber degradation is a key function of the human gut microbiota. The aim of this study was ...
Broiler responses to virulent and avirulent Clostridium perfringens RNA-seq of coding RNA 12-08-2015 Purpose: Analyze gene expression during C. perfringens colonization in the chicken Transcriptomic pr...
Next Generation Sequencing identifies Cdh11 and Mrc1 as novel translational biomarkers of kidney fibrosis RNA-seq of coding RNA 12-08-2015 Chronic kidney disease (CKD) is the gradual, asymptomatic loss of kidney function and current tests ...
Transcription factor trapping by RNA in gene regulatory elements other
RNA-seq of coding RNA
12-08-2015 This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Drug-based modulation of endogenous stem cells promotes functional remyelination in vivo RNA-seq of coding RNA 08-19-2015 Multiple sclerosis involves an aberrant autoimmune response and progressive failure of remyelination...
Genome-wide mapping of promoter-enhancer interactions with HiCap other
RNA-seq of coding RNA
08-19-2015 This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Transcript profiles of juvenile female brown trout exposed to glyphosate and Roundup herbicides. RNA-seq of coding RNA 08-19-2015 This study aimed to investigate the hepatic transcriptional response of brown trout to glyphosate, a...
Global identification of genes specific for rice meiosis RNA-seq of coding RNA 08-19-2015 The leptotene-zygotene transition is a major step in meiotic progression during which pairing betwee...
Genome-wide mapping of promoter-enhancer interactions with HiCap [RNA-seq] RNA-seq of coding RNA 08-19-2015 Although the locations of promoters and enhancers have been identified in several cell types, we hav...
EZH2 inhibitor efficacy in non-Hodgkin lymphoma does not require suppression of H3K27 mono-methylation [RNA-Seq] RNA-seq of coding RNA 08-19-2015 Here we report the discovery of highly potent and selective EZH2 small molecule inhibitors, their va...
Leucegene: AML sequencing (part 4) RNA-seq of coding RNA 08-19-2015 RNA sequencing of human leukemia The goals of this project are to obtain a comprehensive study of mu...
A novel analytical brain block tool to enable functional annotation of discriminatory transcript biomarkers among discrete regions of the fronto-limbic circuit in primate brain RNA-seq of coding RNA 08-19-2015 We describe a novel method for obtaining discrete regions from the fronto-limbic circuits of a 4 yea...
High-throughput sequencing of mouse liver transcriptome. RNA-seq of coding RNA 08-19-2015 Circadian profile of polyA RNA by RNA-Seq, collected from mouse liver at CT23, CT29, CT35, CT41, CT4...
The carbonic anhydrase inhibitor ethoxzolamide inhibits the Mycobacterium tuberculosis PhoPR regulon and Esx-1 secretion and attenuates virulence RNA-seq of coding RNA 08-19-2015 The purpose of this study was to examine how ethoxzolamide modulates gene M. tuberculosis gene expre...
Purification and transcriptomic analysis of mouse fetal Leydig cells reveals candidate genes for disorders of sex development RNA-seq of coding RNA 08-19-2015 To examine the transcriptome of early testicular somatic cells during gonadogenesis at 12.5dpc RNA s...
Small RNA mediated immune responses: insights from analyses of nine soybean R-gene near-isogenic lines and their susceptible parent RNA-seq of non coding RNA 08-19-2015 Small RNAs, including microRNAs (miRNAs) and small interfering RNAs (siRNAs) are negative regulators...
dsRNA-seq of Physcomitrella patens rdr mutants RNA-seq of coding RNA 08-19-2015 To investigate the effects of rdr2 and rdr6 mutations upon the strucutred component of the Physcomit...