Transcriptome of a mouse kidney cortical collecting duct cell line: effects of aldosterone and vasopressin
In this study, we analyzed the transcriptome of a highly differentiated mouse clonal CCD principal c...
DIP-chip from Cbf1, Leu3, Pho2, Pho4, Rap1, Rox1, and Swi5
DNA Immunoprecipitation was performed using purified, naked, genomic DNA and purified recombinant DN...
Tet1 and hydroxymethylcytosine in transcription and DNA methylation fidelity (ChIP/ DIP-Seq data)
We analyzed the genome-wide binding of Tet1 in control (shScr) and Tet1 knockdown (shTet1) mouse ES ...
Translational control in early adipogenesis
In obesity, adipose tissue expands by increasing the volume of existing adipocytes (hypertrophy), in...
Methyl DIP-chip from self-pollinated ddm1 mutant and ddm1 kyp double mutant
Methylation of histone H3 lysine 9 (H3K9me) and small RNA are associated with constitutively silent ...
Role of Serine 134 phosphorylation of the glucocorticoid receptor (GR) in glucocorticoid signaling
In response to environmental stressors and a variety of inflammatory cytokines, p38 MAPKs become dir...
Adenosine 5’ monophosphate-activated protein kinase regulates metabolic actions of glucocorticoids by phosphorylating the glucocorticoid receptor through p38 mitogen-activated protein kinase
Glucocorticoids play central roles in the regulation of energy metabolism by shifting it toward cata...
Transcription profiling by array of diploid, triplod and tetraploid Arabidopsis plants
By reciprocally crossing 2x and 4x C24 ecotype plants, we have generated 4 types of offspring with v...
Reconstruction of the dynamic regulatory network that controls Th17 cell differentiation by systematic perturbation in primary cells (ChIP-Seq)
Despite their enormous importance, the molecular circuits that control the differentiation of Th17 c...
Loss of TET2 in hematopoietic cells leads to DNA hypermethylation of active enhancers and induction of leukemogenesis (MeDIP-seq)
DNA methylation is tightly regulated throughout mammalian development and altered methylation patter...
Genome-wide analysis of expression and DNA methylation at CpG-island-associated sense-antisense transcript loci in mouse
Sense-antisense transcript (SAT) pairs are pairs of transcripts that fully or partially overlap but ...
Novel targets for the transcription factors MEF2 in MA-10 Leydig cells
Testosterone production by Leydig cells is a tightly regulated process requiring synchronized expres...
Base-resolution maps of 5-formylcytosine and 5-carboxylcytosine reveal genome-wide DNA demethylation dynamics
5-methylcytosine (5mC), the predominant epigenetic modification on DNA, plays critical roles in mamm...
Genome-wide analysis reveals TET- and TDG-mediated 5-methylcytosine oxidation dynamics [MeDIP-Seq]
Ten-eleven translocation (Tet) family of DNA dioxygenases converts 5-methylcytosine (5mC) into 5-hyd...
A library of yeast transcription factor motifs
The sequence specificity of DNA-binding proteins is the primary mechanism by which the cell recogniz...
Epigenetic and transcriptional landscapes of Dnmt3a-deficient olfactory sensory neurons
During differentiation, neurons experience a reorganization of DNA modification patterns within thei...
Complementary Expression of Immunoglobulin Superfamily Ligands and Receptors in Synaptic Pairs in the Drosophila Visual System
Purpose: Information processing in the brain relies on precise patterns of synapses between neurons....
Global Analysis of the Expression of Salmonella RyhB regulon
Analysis of the Expression Change of RyhB Regulon in RyhB-deleted Mutant Strains. Wild-type Salmonel...
Expression data from post mortem porcine skeletal muscle
We set up a pilot study using Affymetrix Gene Chip® Porcine Genome Arrays to evaluate the impact of...
Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
RESEARCH SUMMARY Bacterial blight and bacterial leaf streak, two of the most serious diseases of...