KDM5B - OmicsDI | bioCADDIE Data Discovery Index

biomedical and healthCAre Data Discovery Index Ecosystem

Repositories

PDB (49)
BioProject (41)
ArrayExpress (32)
UniProt:Swiss-Prot (21)
OmicsDI (19)
Dryad (1)
Retina (1)
NIMH (1)
ClinVar (2)

Keywords

Feedback?

If you are having problems using our tools, or if you would just like to send us some feedback, please post your questions on GitHub.

Displaying 19 of 19 results for "KDM5B"

Switch View:

Sorted By:

Dataset Title	Keywords	Date Released	Description
Extended self-renewal and accelerated reprogramming in the absence of Kdm5b [ChIP-Seq]	ChIP-seq	11-25-2013	ES cell pluripotency is thought to be regulated in part by H3K4 methylation. However, it is unclear ...
Extended self-renewal and accelerated reprogramming in the absence of Kdm5b [RNA-Seq]	RNA-seq of coding RNA	11-25-2013	ES cell pluripotency is thought to be regulated in part by H3K4 methylation. However, it is unclear ...
KDM5B focuses H3K4 methylation near promoters and enhancers during embryonic stem cell self-renewal and differentiation [RNA-Seq]	RNA-seq of coding RNA	05-30-2014	Pluripotency of embryonic stem (ES) cells is controlled in part by chromatin-modifying factors that ...
KDM5B focuses H3K4 methylation near promoters and enhancers during embryonic stem cell self-renewal and differentiation [ChIP-Seq]	ChIP-seq	05-31-2014	Pluripotency of embryonic stem (ES) cells is controlled in part by chromatin-modifying factors that ...
Extended self-renewal and accelerated reprogramming in the absence of Kdm5b	RNA-seq of coding RNA ChIP-seq	06-03-2014	This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
KDM5B focuses H3K4 methylation near promoters and enhancers during embryonic stem cell self-renewal and differentiation	RNA-seq of coding RNA ChIP-seq	06-03-2014	This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming [RNA-seq]	RNA-seq of coding RNA	05-22-2016	Differentiated cell can be reprogrammed into totipotent embryo through somatic cell nuclear transfer...
Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming [RRBS]	methylation profiling by high throughput sequencing	05-22-2016	Differentiated cell can be reprogrammed into totipotent embryo through somatic cell nuclear transfer...
Single Cell Sequencing Identifies Key Epigenetic Regulators in Nuclear Transfer Mediated Reprogramming [ChIP-seq]	ChIP-seq	05-22-2016	Differentiated cell can be reprogrammed into totipotent embryo through somatic cell nuclear transfer...
Expression data from HDAC1 and HDAC2 knocked-out mouse oocyte	transcription profiling by array	01-09-2012	Dramatic changes in chromatin structure and histone modification occur during oocyte growth, as well...
SUMO-2 Orchestrates Chromatin Modifiers in Response to DNA Damage	damage repair MMS site SUMO DNA chromatin SUMO-2	03-16-2015	Small Ubiquitin-like Modifiers play critical roles in the DNA Damage Response (DDR). To increase our...
The H3K4-methyl epigenome regulates MLL leukemia stem cell oncogenic potential	ChIP-seq	08-19-2015	The genetic programs that maintain leukemia stem cell (LSC) self-renewal and oncogenic potential hav...
Jarid1b targets genes regulating development and is involved in neural differentiation [expression array]	transcription profiling by array	11-14-2011	The H3K4me2/3 histone demethylase Jarid1b (Kdm5b/Plu1) is dispensable for embryonic stem cell (ESC) ...
Histone Demethylase JARID1B Controls Mammary Gland Development by Regulating Key Developmental Genes	transcription profiling by array	06-03-2014	The jmjC-domain containing H3K4 histone demethylase JARID1B/KDM5B/PLU1 is over-expressed in human br...
The histone demethylase Jarid1b ensures faithful mouse development by protecting developmental genes from aberrant H3K4me3 [ChIP-Seq]	ChIP-seq	05-07-2013	Embryonic development is tightly regulated by transcription factors and chromatin-associated protein...
The histone demethylase Jarid1b ensures faithful mouse development by protecting developmental genes from aberrant H3K4me3 [Affymetrix]	transcription profiling by array	05-07-2013	Embryonic development is tightly regulated by transcription factors and chromatin-associated protein...
Sperm is epigenetically programmed to regulate gene transcription in embryo	RNA-seq of coding RNA ChIP-seq methylation profiling by high throughput sequencing	03-26-2016	Using the frog Xenopus laevis as a model system we profile epigenetic features of sperm and spermati...
Identification and characterization of FGF2-dependent mRNA:microRNA networks during lens fiber cell differentiation	transcription profiling by array	06-03-2014	Background: FGF signaling controls numerous processes during cell lineage specification, organogenes...
IMR90 radiation bystander time-course experiment 0.5Gy alpha particle	transcription profiling by array	03-27-2012	The radiation bystander effect is an important component of the overall biological response of tissu...