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Dataset Title Keywords Date Released Description
Natural Variation in Fish Transcriptomes: Comparative Analysis of the Fathead Minnow (Pimephales promelas) and Zebrafish (Danio rerio) unknown experiment type
transcription profiling by array
08-19-2015 This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Dazl is required for TET-mediated reprogramming to a naïve pluripotent state (I) transcription profiling by array 08-19-2015 Embryonic stem cell (ESC) cultures display a heterogeneous gene expression profile, ranging from a p...
Gata6 potently initiates reprogramming of pluripotent and differentiated cells to extraembryonic endoderm stem cells [time-course microarray] transcription profiling by array 08-19-2015 Transcription factor-mediated reprogramming is a powerful method to study cell fate changes. In this...
E. histolytica and E. invadens RNA-seq of non coding RNA 08-19-2015 This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
Expression data from primary human mammary fibroblasts purified from disease-free women of low and high mammographic density transcription profiling by array 08-18-2015 Although high mammographic density (MD) is considered one of the strongest risk factors for invasive...
Gene expression profile of hemocytes from Manila clam (Venerupis philippinarum) after a Perkinsus olseni challenge using an immune-enriched oligo-microarray transcription profiling by array 08-19-2015 Parasites of the genus Perkinsus spp. cause high mortalities and economic losses to the most noticea...
A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (ChIP-Seq) ChIP-seq 08-19-2015 Epigenetic dysregulation has emerged as an important mechanism in cancer. Alterations in epigenetic...
Tbx3 controls Dppa3 levels to regulate exit from pluripotency towards mesodermal lineage RNA-seq of coding RNA
ChIP-seq
08-19-2015 Tbx3, a member of the T-box family, plays important roles in development, stem cells, nuclear reprog...
Aberrant ERK signaling causes resistance to EGFR kinase inhibitors transcription profiling by array 08-18-2015 The clinical efficacy of EGFR kinase inhibitors is limited by the development of drug resistance. Th...
Gene expression profiling of human Ewing sarcoma cells after knockdown of EGR2 or EWSR1-FLI1. transcription profiling by array 08-19-2015 To get insight in the functional role of EGR2 for Ewing sarcoma, we performed a transcriptional prof...
Effect of type 2 diabetes on transcriptional signatures during exercise and recovery transcription profiling by array 08-19-2015 We performed gene expression microarray analysis of skeletal muscle biopsies from normal glucose tol...
Expression data analyzed with LPIA in A549 lung carcinoma cells treated with geldanamycin. transcription profiling by array 08-11-2015 The statsitcal model, latent pathway identification analysis (LPIA), was implemented for the analysi...
Exon expression for NCI Sarcoma cell line panel transcription profiling by array 08-19-2015 Characterization of 68 cell lines derived from human sarcoma and 5 normal counterpart cells, includ...
System-Wide Analysis Reveals a Complex Network of Tumor-Fibroblast Interactions Involved in Tumorigenicity transcription profiling by array 08-19-2015 We’ve undertaken a genome-wide approach to identify and test genes in fibroblasts that are both in...
Conversion of MyoD to a neurogenic factor: binding site specificity determines lineage [RNA-seq] RNA-seq of coding RNA 08-19-2015 MyoD and NeuroD2 are master regulators of myogenesis and neurogenesis and bind to a "shared&quo...
Small RNAs during E. histolytica stress response RNA-seq of non coding RNA 08-19-2015 We analyzed ~27nt small RNAs from Entamoeba histolytica trophozoites in basal conditions and after h...
Genome-wide expression of the leukemic cells with different sensitivity to AraC transcription profiling by array 08-19-2015 To examine the molecular alterations in cells with different sensitivity, genome-wide expression of ...
CGH analyses for the Chinese indigenous pig breeds and commercial pig breeds [Agilent] comparative genomic hybridization by array 08-19-2015 Since CNVs play a vital role in genomic studies, it is an imperative need to develop a comprehensive...
Germline duplication of ATG2B and GSKIP predisposes to familial essential thrombocythemia rapidly progressing to acute leukemia comparative genomic hybridization by array 08-19-2015 No major predisposing gene for familial myeloproliferative neoplasms (MPN) has been identified. Here...
Integrative ‘omic analysis of experimental bacteremia identifies a metabolic signature that distinguishes human sepsis from SIRS RNA-seq of coding RNA 08-19-2015 Rationale: Sepsis is a leading cause of morbidity and mortality; early diagnosis and prediction of p...