Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Title: DPOL_BPKVM      
types:
sequence
dateReleased:
07-05-2004
privacy:
not applicable
availability:
available
version:
1
creators:
Miller E.S.
Heidelberg J.F.
Eisen J.A.
Nelson W.C.
Durkin A.S.
Ciecko A.
Feldblyum T.V.
White O.
Paulsen I.T.
Nierman W.C.
Lee J.
Szczypinski B.
Fraser C.M.
ID:
Q6WI70
keywords:
Complete proteome
DNA replication
DNA-binding
DNA-directed DNA polymerase
Exonuclease
Hydrolase
Magnesium
Metal-binding
Multifunctional enzyme
Nuclease
Nucleotidyltransferase
Reference proteome
Transferase
Viral DNA replication
refinement:
curated
aggregation:
instance of dataset
description:
DNA-directed DNA polymerase 3'-5'exonuclease Beta hairpin Polymerase Substrate binding Binding of DNA in B-conformation Interaction with the polymerase clamp Magnesium 1; catalytic; for 3'-5' exonuclease activity Magnesium 1; catalytic; for 3'-5' exonuclease activity Magnesium 2; catalytic; for 3'-5' exonuclease activity Magnesium 1; catalytic; for 3'-5' exonuclease activity Magnesium 2; catalytic; for 3'-5' exonuclease activity Magnesium 3; catalytic; for polymerase activity Magnesium 4; catalytic; for polymerase activity Magnesium 4; catalytic; via carbonyl oxygen; for polymerase activity Magnesium 3; catalytic; for polymerase activity Magnesium 4; catalytic; for polymerase activity Substrate Substrate Optimization of metal coordination by the polymerase active site Optimization of metal coordination by the polymerase active site Essential for viral replication
name:
Vibrio phage KVP40 (isolate Vibrio parahaemolyticus/Japan/Matsuzaki/1991)
strain:
KVP40
ID:
ncbitax:1283340
year:
2003
authorsList:
Miller E.S.
Heidelberg J.F.
Eisen J.A.
Nelson W.C.
Durkin A.S.
Ciecko A.
Feldblyum T.V.
White O.
Paulsen I.T.
Nierman W.C.
Lee J.
Szczypinski B.
Fraser C.M.
type:
PubMed
DOI
ID: pmid:12923095
doi:10.1128/JB.185.17.5220-5233.2003
name:
DNA-directed DNA polymerase
authorization:
none
authentication:
none
format:
HTML
storedIn:
UniProt
accessType:
landing page
qualifier:
not compressed
accessURL: http://www.uniprot.org/uniprot/Q6WI70
license:
Creative Commons Attribution-NoDerivs License
authorization:
none
authentication:
none
format:
FASTA
storedIn:
UniProt
accessType:
download
qualifier:
not compressed
accessURL: http://www.uniprot.org/uniprot/Q6WI70.fasta
license:
Creative Commons Attribution-NoDerivs License
name:
European Bioinformatics Institute
abbreviation:
EMBL-EBI
ID:
SCR:004727
homePage: http://www.ebi.ac.uk/
name:
UniProt
abbreviation:
UniProt
ID:
SCR:002380
homePage: http://www.uniprot.org/

Feedback?

If you are having problems using our tools, or if you would just like to send us some feedback, please post your questions on GitHub.