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Title: RNAseq of matched normal epithelium, oral dysplasia and oral squamous cell carcinoma : RNAseq of matched normal epithelium, oral dysplasia and oral squamous cell carcinoma using strand-specific methods that capture both coding and non-coding genes      
keywords:
Other
ID:
PRJEB6413
description:
Whole transcriptome sequencing of 19 matched patient sample trios: normal oral epithelium, oral dysplasia and oral squamous cell carcinoma from the same patent. All material is from FFPE blocks that have been stained and sections and had sample histology confirmed by 2 independent pathologists. A ScriptSeq library kit was used to create strand specific 100bp paired-end sequencing libraries following RiboZero treatment to deplete rRNA. Both coding and non-coding RNA <200bp is sequenced on an Illumina HiSeq2500 with an average of 4 samples per lane.
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landingpage: http://www.ncbi.nlm.nih.gov/bioproject/PRJEB6413
authentication:
none
authorization:
none
dateReleased:
07-29-2015
abbreviation:
NCBI
homePage: http://www.ncbi.nlm.nih.gov
ID:
SCR:006472
name:
National Center for Biotechnology Information
homePage: http://www.ncbi.nlm.nih.gov/bioproject
ID:
SCR:004801
name:
NCBI BioProject