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Title: Genome-wide map of PCL2 (Polycomb-like 2) enrichment in undifferentiated mouse embryonic stem cells (ESCs)      
keywords:
Epigenomics
ID:
PRJNA116091
description:
In total 8,736,191 reads from IP fraction and 9,958,984 reads from Wash fraction uniquely mapped to the mouse genome (mm9). Settings for enrichment analysis: maxSpacing=500; minHits=20; minPeakHits=6; minRatio=3. 4,701 regions have been identified as enriched in the IP fraction. In order to get a rough idea of false discovery rate (FDR), enrichment analysis using Wash fraction as test and IP fraction as control was performed, 15 regions was found. This suggests that the FDR likely is around 0.3%. Keywords: Epigenetics Overall design: Examination of PCL2 enrichment in mouse ESCs.
accesstypes:
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landingpage: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA116091
authentication:
none
authorization:
none
ID:
pmid:20144788
dateReleased:
02-05-2010
name:
Mus musculus
ncbiID:
ncbitax:10090
abbreviation:
NCBI
homePage: http://www.ncbi.nlm.nih.gov
ID:
SCR:006472
name:
National Center for Biotechnology Information
homePage: http://www.ncbi.nlm.nih.gov/bioproject
ID:
SCR:004801
name:
NCBI BioProject
  • R01 AR054396/AR/NIAMS NIH HHS/United States

  • R01 AR054396-01A1/AR/NIAMS NIH HHS/United States

  • MOP-74528/Canadian Institutes of Health Research/Canada

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