biomedical and healthCAre Data Discovery Index Ecosystem
biomedical and healthCAre Data Discovery Index Ecosystem
| Title: | Transcriptome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)
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| dateReleased: |
09-19-2016
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| description: |
We classified samples and deciphered a key genes signature of intratumor heterogeneity by Principal Component Analysis and Weighted Gene Co-expression Network Analysis. Transcriptome analysis highlighted a pronounced intratumor architecture reflecting the surgical sampling plan of the study and identified gene modules associated with hallmarks of cancer.
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| privacy: |
not applicable
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| aggregation: |
instance of dataset
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| ID: |
E-MTAB-5092
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| refinement: |
raw
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| dateSubmitted: |
09-19-2009
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| keywords: |
functional genomics
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| dateModified: |
09-20-2016
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| creators: |
Amandine Etcheverry
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| availability: |
available
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| types: |
gene expression
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| name: |
Homo sapiens
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| name: |
cell type comparison design
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| ID: |
A-AGIL-11
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| name: |
Agilent Whole Human Genome Oligo Microarray 012391 G4112A
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5092/E-MTAB-5092.raw.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5092/E-MTAB-5092.processed.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| abbreviation: |
EBI
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| homePage: | http://www.ebi.ac.uk/ |
| ID: |
SCR:004727
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| name: |
European Bioinformatics Institute
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| homePage: | https://www.ebi.ac.uk/arrayexpress/ |
| ID: |
SCR:002964
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| name: |
ArrayExpress
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