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Title: Mock or latently infected KSHV cells (BCBL, SLK and HFF)      
dateReleased:
06-05-2010
description:
[original title] Mock or latently infected KSHV cells (BCBL, SLK and HFF) vs common reference (mixture of RNA from both infected and uninfected cells). Expression profiling of latently infected cells using a custom tiling microarray. SLK and HFF cells were infected and selected for rKSHV.219. Mock infected SLK and HFF cells served as controls for each of these two stably infected cells, respectively. BJAB cells served as uninfected controls for the BCBL-1 cells. Biological replicates were harvested and analyzed. Two condition experiment: mock infected vs. latently infected cells. Three cell types.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-20443
refinement:
raw
alternateIdentifiers:
20443
dateSubmitted:
02-22-2010
keywords:
functional genomics
dateModified:
05-01-2014
availability:
available
types:
gene expression
ID:
A-GEOD-10083
name:
KSHV tiling microarray AMADID: 017577
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-20443/E-GEOD-20443.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-20443/E-GEOD-20443.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE20443
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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