biomedical and healthCAre Data Discovery Index Ecosystem
biomedical and healthCAre Data Discovery Index Ecosystem
| Title: | Structural Basis of ICAM recognition by integrin alpahLbeta2 revealed in the complex structure of binding domains of ICAM-3 and alphaLbeta2 at 1.65 A
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| description: |
Integrin alpha-L/Intercellular adhesion molecule-3
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| privacy: |
not applicable
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| aggregation: |
instance of dataset
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| ID: |
PDB:1T0P
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| refinement: |
curated
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| keywords: |
IMMUNE SYSTEM
Rossmann Fold; IG-super family domain
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| creators: |
Song, G.
Yang, Y.
Liu, J.H.
Casasnovas, J.M.
Shimaoka, M.
Springer, T.A.
Wang, J.H.
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| availability: |
available
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| types: |
structure
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| name: |
Homo sapiens
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| ID: |
ncbitax:9606
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| name: |
Homo sapiens
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| ID: |
ncbitax:9606
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| name: |
Escherichia coli
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| ID: |
ncbitax:562
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| name: |
Cricetulus griseus
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| ID: |
ncbitax:10029
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| authors: |
Song, G.
Yang, Y.
Liu, J.H.
Casasnovas, J.M.
Shimaoka, M.
Springer, T.A.
Wang, J.H.
|
| alternateID: |
doi:10.1073/pnas.0500200102
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| year: |
2005
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| ID: | pmid:15728350 |
| title: |
An atomic resolution view of ICAM recognition in a complex between the binding domains of ICAM-3 and integrin alphaLbeta2.
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| formula: |
C5 H11 N O2 S
|
| name: |
METHIONINE
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| roles: |
chemical component
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| formula: |
C2 H5 N O2
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| name: |
GLYCINE
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| roles: |
chemical component
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| formula: |
C4 H8 N2 O3
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| name: |
ASPARAGINE
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| roles: |
chemical component
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| formula: |
C5 H11 N O2
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| name: |
VALINE
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| roles: |
chemical component
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| formula: |
C4 H7 N O4
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| name: |
ASPARTIC ACID
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| roles: |
chemical component
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| formula: |
C6 H13 N O2
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| name: |
LEUCINE
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| roles: |
chemical component
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| formula: |
C9 H11 N O2
|
| name: |
PHENYLALANINE
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| roles: |
chemical component
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| formula: |
C3 H7 N O3
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| name: |
SERINE
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| roles: |
chemical component
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| formula: |
C5 H10 N2 O3
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| name: |
GLUTAMINE
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| roles: |
chemical component
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| formula: |
C5 H9 N O2
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| name: |
PROLINE
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| roles: |
chemical component
|
| formula: |
C5 H9 N O4
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| name: |
GLUTAMIC ACID
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| roles: |
chemical component
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| formula: |
C6 H15 N2 O2 1
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| name: |
LYSINE
|
| roles: |
chemical component
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| formula: |
C6 H13 N O2
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| name: |
ISOLEUCINE
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| roles: |
chemical component
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| formula: |
C4 H9 N O3
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| name: |
THREONINE
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| roles: |
chemical component
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| formula: |
C9 H11 N O3
|
| name: |
TYROSINE
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| roles: |
chemical component
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| formula: |
C3 H7 N O2
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| name: |
ALANINE
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| roles: |
chemical component
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| formula: |
C11 H12 N2 O2
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| name: |
TRYPTOPHAN
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| roles: |
chemical component
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| formula: |
C6 H10 N3 O2 1
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| name: |
HISTIDINE
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| roles: |
chemical component
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| formula: |
C6 H15 N4 O2 1
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| name: |
ARGININE
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| roles: |
chemical component
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| formula: |
C3 H7 N O2 S
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| name: |
CYSTEINE
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| roles: |
chemical component
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| formula: |
C8 H15 N O6
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| name: |
N-ACETYL-D-GLUCOSAMINE
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| roles: |
chemical component
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| formula: |
MG 2
|
| name: |
MAGNESIUM ION
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| roles: |
chemical component
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| formula: |
H2 O
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| name: |
WATER
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| roles: |
chemical component
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| name: |
X-RAY DIFFRACTION
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| ID: |
pdb:1T0P
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| ID: |
rcsb:RCSB022166
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| accessURL: | https://files.rcsb.org/download/1T0P.xml.gz |
| storedIn: |
Protein Data Bank
|
| qualifier: |
gzip compressed
|
| license: |
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all copyright restrictions and made fully and freely available for both non-commercial and commercial use. Users of the data should attribute the original authors of that structural data. By using the materials available in the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice.
|
| format: |
PDBML/XML
|
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download
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| authentication: |
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| authorization: |
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| accessURL: | https://files.rcsb.org/download/1T0P.pdb.gz |
| storedIn: |
Protein Data Bank
|
| qualifier: |
gzip compressed
|
| license: |
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all copyright restrictions and made fully and freely available for both non-commercial and commercial use. Users of the data should attribute the original authors of that structural data. By using the materials available in the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice.
|
| format: |
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| accessType: |
download
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| authentication: |
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| authorization: |
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| accessURL: | https://files.rcsb.org/download/1T0P.cif.gz |
| storedIn: |
Protein Data Bank
|
| qualifier: |
gzip compressed
|
| license: |
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all copyright restrictions and made fully and freely available for both non-commercial and commercial use. Users of the data should attribute the original authors of that structural data. By using the materials available in the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice.
|
| format: |
PDBx/mmCIF
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| accessType: |
download
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| authentication: |
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| authorization: |
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| accessURL: | http://www.rcsb.org/pdb/download/downloadFile.do?fileFormat=FASTA&compression=NO&structureId=1T0P |
| storedIn: |
Protein Data Bank
|
| license: |
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all copyright restrictions and made fully and freely available for both non-commercial and commercial use. Users of the data should attribute the original authors of that structural data. By using the materials available in the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice.
|
| format: |
FASTA
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| accessType: |
download
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| authentication: |
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| authorization: |
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| accessURL: | https://files.rcsb.org/download/1T0P-sf.cif.gz |
| storedIn: |
Protein Data Bank
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| qualifier: |
gzip compressed
|
| license: |
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all copyright restrictions and made fully and freely available for both non-commercial and commercial use. Users of the data should attribute the original authors of that structural data. By using the materials available in the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice.
|
| format: |
CIF
|
| accessType: |
download
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| authentication: |
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| authorization: |
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| accessURL: | https://files.rcsb.org/download/1T0P.pdb1.gz |
| storedIn: |
Protein Data Bank
|
| qualifier: |
gzip compressed
|
| license: |
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all copyright restrictions and made fully and freely available for both non-commercial and commercial use. Users of the data should attribute the original authors of that structural data. By using the materials available in the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice.
|
| format: |
PDB Format (A)
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| accessURL: | http://www.rcsb.org/pdb/explore/jmol.do?structureId=1T0P&bionumber=1 |
| storedIn: |
Protein Data Bank
|
| license: |
Data files contained in the PDB archive (ftp://ftp.wwpdb.org) are free of all copyright restrictions and made fully and freely available for both non-commercial and commercial use. Users of the data should attribute the original authors of that structural data. By using the materials available in the PDB archive, the user agrees to abide by the conditions described in the PDB Advisory Notice.
|
| format: |
JSmol
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| accessType: |
view
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| authentication: |
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| abbreviation: |
wwPDB
|
| homePage: | http://www.wwpdb.org |
| ID: |
SCR:006555
|
| name: |
Worldwide Protein Data Bank
|
| abbreviation: |
PDB
|
| homePage: | http://www.rcsb.org/pdb/ |
| ID: |
SCR:012820
|
| name: |
Protein Data Bank
|
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