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Metadata

Name
MALDI-TOF spectra of archaeological (Oncorhynchus) and modern (Salmo salar) bone collagen
Repository
ZENODO
Identifier
doi:10.5281/zenodo.2649336
Description
SPECIES INFORMATION
csv containing information about the samples that links the information about the species and files


MALDI TOF-MS

MALDI Spectra from a Bruker Ultraflex II range m/z 800-3500
Three technical replicates were averaged in mMass
Each of these spectra a tab delimited .txt file are uploaded


SEQUENCE DATA
An aligned FASTA file containing the bovine reference collagen sequence and both versions of S. salar and O. mykiss sequences. &nbsp;The sequences are concatenated with COL1A1, COL1A2, and COL1A3 for the two fish and COL1A1, COL1A2, COL1A1 for bovine.

Three annotated gff files containing the sequence from version 1 of S. salar annotated with the locations of the published mammal markers and the biomarkers presented in this paper. &nbsp;Each gff file corresponds to one of the three collagen proteins COL1A1, COL1A2, and COL1A3.
Data or Study Types
multiple
Source Organization
Unknown
Access Conditions
available
Year
2019
Access Hyperlink
https://doi.org/10.5281/zenodo.2649336

Distributions

  • Encoding Format: HTML ; URL: https://doi.org/10.5281/zenodo.2649336
This project was funded in part by grant U24AI117966 from the NIH National Institute of Allergy and Infectious Diseases as part of the Big Data to Knowledge program. We thank all members of the bioCADDIE community for their valuable input on the overall project.