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Title: mut-16 and other mutator-class genes modulate 22G and 26G siRNA pathways in Caenorhabditis elegans      
availability:
available
aggregation:
instance of dataset
privacy:
not applicable
refinement:
curated
dateReleased:
08-21-2013
ID:
E-GEOD-26165
description:
Argonaute-associated siRNAs and Piwi-associated piRNAs have overlapping roles in silencing mobile genetic elements in animals. In C. elegans, mutator-class (mut) genes mediate siRNA-guided repression of transposons as well as exogenous RNA-directed gene silencing (RNAi), but their roles in endogenous RNA silencing pathways are not well understood. To characterize the endogenous small RNAs dependent on mutator-class genes, small RNA populations from a null allele of mut-16, as well as a regulatory mut-16(mg461) allele that disables only somatic RNAi, were subjected to deep sequencing. Small RNA analysis in wild type and mut-16 mutant C. elegans strains
keywords:
RNA-seq of non coding RNA
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accessURL: https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-26165
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JSON
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OmicsDI
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accessType:
download
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accessURL: www.omicsdi.org/ws/dataset/arrayexpress-repository/E-GEOD-26165.json
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OmicsDI
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accessType:
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accessURL: http://www.omicsdi.org/ws/dataset/arrayexpress-repository/E-GEOD-26165.xml
ID:
SCR:014747
name:
Omics Discovery Index
abbreviation:
OmicsDI
homePage: http://www.omicsdi.org/