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Title: CRISPResso: sequencing analysis toolbox for CRISPR genome editing      
keywords:
Other
ID:
PRJNA313328
description:
CRISPResso is a software pipeline for the analysis of targeted CRISPR-Cas9 deep sequencing data. This algorithm allows for the quantification of both non-homologous end joining (NHEJ) and homologous directed repair (HDR) occurrences (https://github.com/lucapinello/CRISPResso) Overall design: Cells nucleofected with either CRISPR/Cas9 alone or with CRISPR/Cas9 and a homologous donor template were subjected to targeted high-throughput sequencing of the beta-globin locus. Here, one sample with just CRISPR/Cas9 edited cells and 2 samples with CRISPR/Cas9 and donor edited cells were analyzed.
accesstypes:
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landingpage: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA313328
authentication:
none
authorization:
none
ID:
pmid:27404874
name:
Homo sapiens
ncbiID:
ncbitax:9606
abbreviation:
NCBI
homePage: http://www.ncbi.nlm.nih.gov
ID:
SCR:006472
name:
National Center for Biotechnology Information
homePage: http://www.ncbi.nlm.nih.gov/bioproject
ID:
SCR:004801
name:
NCBI BioProject
  • R01 HL119099/HL/NHLBI NIH HHS/United States

  • T32 HL007574/HL/NHLBI NIH HHS/United States

  • K08 DK093705/DK/NIDDK NIH HHS/United States

  • R01 HL032259/HL/NHLBI NIH HHS/United States

  • P30 DK049216/DK/NIDDK NIH HHS/United States

  • K99 HG008399/HG/NHGRI NIH HHS/United States

  • P01 HL032262/HL/NHLBI NIH HHS/United States

  • R01 HG005085/HG/NHGRI NIH HHS/United States

  • F30 DK103359/DK/NIDDK NIH HHS/United States

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