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Title: High-throughput pyrosequencing of endogenous small RNAs from Solanum lycopersicum leaf and fruit      
dateReleased:
08-21-2008
description:
Comparison of the endogenous small RNA content of tomato leaves and fruits. Size fractionated small RNA from total RNA extracts was ligated to adapters, purified again and reverse transcribed. After PCR amplification the sample was subjected to 454 high throughput pyrosequencing. Please see www.454.com for details of the sequencing technology. Note: Raw data files were not available from 454 at the time this experiment was carried out.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-12081
refinement:
raw
alternateIdentifiers:
12081
keywords:
functional genomics
dateModified:
06-02-2014
availability:
available
types:
gene expression
name:
Solanum lycopersicum
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-12081/E-GEOD-12081.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-12081/E-GEOD-12081.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE12081
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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