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Title: Bile stress response in probiotic Lactobacillus rhamnosus GG      
dateReleased:
01-01-2011
description:
Transcriptional profiling of probiotic Lactobacillus rhamnosus strain GG mid-exponential pH-controlled bioreactor cultures before and after exposure to bovine bile (0.2% ox gall). Keywords: bile, stress response Cell samples from four biological replicates were harvested right before (time point 0 min) and 10, 30 and 120 min after bile treatment. Each sample was compared to a common reference sample (time point 0 min, mid-exponential growth phase Lactobacillus rhamnosus GG cultures). A total of 12 hybridizations were performed using balanced dye-swap design. Dyes were balanced between compared sample pairs and between biological replicates.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-22536
refinement:
raw
alternateIdentifiers:
22536
keywords:
functional genomics
dateModified:
05-01-2014
availability:
available
types:
gene expression
name:
Lactobacillus rhamnosus
ID:
A-GEOD-10580
name:
Lactobacillus rhamnosus GG whole genome microarray 4X44K
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-22536/E-GEOD-22536.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-22536/E-GEOD-22536.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22536
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress