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Title: Rice plants (Oryza sativa var. japonica): WT vs. MIT knockdown plant      
dateReleased:
04-07-2011
description:
Transcriptional profiling of MIT knockdown plants. MIT is a mitochondrial Fe transporter essential for rice growth and development. The goal was to determine the effects of MIT on global rice gene expression. Control condition experiment, root or shoot of WT vs. MIT knockdown plant. Two replicates each comparison, including a dye swap.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-28428
refinement:
raw
alternateIdentifiers:
28428
keywords:
functional genomics
dateModified:
05-03-2014
availability:
available
types:
gene expression
name:
Oryza sativa Japonica Group
ID:
A-GEOD-8852
name:
Agilent rice genome 4X44k array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-28428/E-GEOD-28428.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-28428/E-GEOD-28428.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE28428
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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