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Title: Pseudomonas aeruginosa gene expression in artificial sputum medium using a broad capture array designated the PANarray      
dateReleased:
07-15-2011
description:
The PANarray design (GPL13324) contains the genes of eight P. aeruginosa genomes in non-redundant format, thus allowing identification of expression of non-PAO1 and other P. aeruginosa genes. For the series GSE28152, isogenic isolates were sequentially collected from two cystic fibrosis (CF) patients several years apart. The isolates had not been eradicated in the meantime and represent persister strains. One was an Australian Epidemic Strain-1 isolate and the other a non-epidemic strain. Strains were cultured in an artificial sputum medium (ASMDM) closely resembling CF sputum.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-28152
refinement:
raw
alternateIdentifiers:
28152
keywords:
functional genomics
dateModified:
08-02-2011
availability:
available
types:
gene expression
name:
Pseudomonas aeruginosa
ID:
A-GEOD-13324
name:
University of Sydney CombiMatrix 12K PANarray
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-28152/E-GEOD-28152.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-28152/E-GEOD-28152.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE28152
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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