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Title: Comparative expression profile of Porphyromonas gingivalis parent strain W83 and the HU protein (PG0121) mutant during exponential growth in rich medium      
dateReleased:
11-30-2011
description:
HU protein regulates expression of genes involved in cell-division, iron acquisition, and transcriptional regulation in Porphyromonas gingivalis Analysis involved RNA extracted from the parent strain W83 and the PG0121 (HU protein) mutant during exponential growth in rich medium. Each of the four experiments used a different preparation of RNA. Comparative expression profiles were determined by hybridizing the microarray slide with a mixture containing equal amount of cDNA generated from each strain. Dye swap experiments were performed.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-34009
refinement:
raw
alternateIdentifiers:
34009
keywords:
functional genomics
dateModified:
05-04-2014
availability:
available
types:
gene expression
name:
Porphyromonas gingivalis
ID:
A-GEOD-4309
name:
JCVI PFGRC Porphyromonas gingivalis 10K v2 array designed primarily based on strain W83
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-34009/E-GEOD-34009.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-34009/E-GEOD-34009.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE34009
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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