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Title: Comparative genomics of Collimonas bacteria      
dateReleased:
12-30-2011
description:
Collimonas is a genus of soil bacteria which comprises three recognized species: C. fungivorans, C. pratensis and C. arenae. The bacteria belonging to this genus share the ability to lyse chitin (chitinolysis) and feed on living fungal hyphae (mycophagy), but they differ in colony morphology, physiological properties and antifungal activity. In order to gain a better insight into the genetic background underlying this phenotypic variability of collimonads, we investigated the variability in the genomic content of five strains representing the three formally recognized Collimonas species. The genomic content of four test strains was hybridized on an array representing the reference strain C. fungivorans Ter331.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-349
refinement:
raw
keywords:
functional genomics
dateModified:
05-03-2014
availability:
available
types:
gene expression
ID:
A-MEXP-1876
name:
2007-01-29_Collimonas_pTER_FT
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-349/E-MTAB-349.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-349/E-MTAB-349.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress