Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Title: DNA methylation analysis of Colon Cancer cell line SW48      
dateReleased:
04-03-2012
description:
We combined gene expression experiments in response to HDAC inhibitor Depsipeptide with DNA methylation level to assess gene reactivation arising from hypermethylated promoters. We did one experiment with 1 untreated and 1 treated batch of cells
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-34427
refinement:
raw
alternateIdentifiers:
34427
keywords:
functional genomics
dateModified:
05-04-2014
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-GEOD-9886
name:
Agilent-017278 whole human genome (hg17) custom 4×44k array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-34427/E-GEOD-34427.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-34427/E-GEOD-34427.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE34427
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress