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Title: Genes differentially expressed Haloferax mediterranei strains: control wild-type strain vs ΔphaA1 strain      
dateReleased:
04-19-2012
description:
Transcriptional profiling of Haloferax mediterranei comparing control wild-type strain with ΔphaA1 strain, in which phaA1 gene are knockouted. ΔphaA1 strain can accumulate PHB only. Goal was to explore the PHA biosynthetic pathway and to determine their impact on primary metabolism in H. mediterranei. Total RNA from the control Haloferax mediterranei and its ΔphaA1 strain were used to generate target cDNA, and then hybridized to 8*15K Haloferax mediterranei genome array genechips, representing about 3800 genes.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-37420
refinement:
raw
alternateIdentifiers:
37420
keywords:
functional genomics
dateModified:
05-03-2014
availability:
available
types:
gene expression
name:
Haloferax mediterranei
ID:
A-GEOD-15465
name:
Agilent-035154 HFM87_33500_exp_v2
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-37420/E-GEOD-37420.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-37420/E-GEOD-37420.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE37420
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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